RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 VSNL1P62760 191 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 PMP22Q01453 160 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 FOLH1Q04609 750 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 GGTA1PQ4G0N0 100 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 CCNYL2Q5T2Q4 361 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 LETMD1Q6P1Q0 360 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 GFRALQ6UXV0 394 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 C16orf47Q6ZP98 133 aaPredicted RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 GPRIN3Q6ZVF9 776 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 PAGE2Q7Z2X7 111 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 GALNTL5Q7Z4T8 443 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 ZNF321PQ8N8H1 164 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 CDYL2Q8N8U2 506 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 CCDC63Q8NA47 563 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 FAM98AQ8NCA5 519 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 METTL6Q8TCB7 284 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 NR4A3Q92570 626 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 UCN3Q969E3 161 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 TMEM237Q96Q45 408 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 ZNF717Q9BY31 904 aaPredicted RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 PPCSQ9HAB8 311 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 FARSBQ9NSD9 589 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.25□□□□□ -0.61
TPM4-212ENST00000590180 TRPS1Q9UHF7 1281 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 ZNF223Q9UK11 482 aaPredicted RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 GRID1Q9ULK0 1009 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 PPT2Q9UMR5 302 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 ERVK-11Q9UQG0 969 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 V9GYY5 206 aaPredicted RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 WWP2O00308 870 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 MANBAO00462 879 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 COPEO14579 308 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 PGRMC2O15173 223 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 PRKNO60260 465 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 OR10H2O60403 315 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ULK1O75385 1050 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SLC25A12O75746 678 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 MLYCDO95822 493 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 NR2F6P10588 404 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ALOX15P16050 662 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 MST1P26927 711 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 HMOX2P30519 316 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 TRHRP34981 398 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 SSR4P51571 173 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 KCNK10P57789 538 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ALDH6A1Q02252 535 aaKnown RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 IFFO1Q0D2I5 559 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 RASA2Q15283 850 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 FAM219BQ5XKK7 198 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 MRM1Q6IN84 353 aaKnown RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 TDRPQ86YL5 185 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 METTL4Q8N3J2 472 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 OR5L2Q8NGL0 311 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 OR2W6PQ8NHA6 318 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SLC2A12Q8TD20 617 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SSC4DQ8WTU2 575 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 CCDC126Q96EE4 140 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SCMH1Q96GD3 660 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SENP5Q96HI0 755 aaPredicted RBP11.24□□□□□ -0.61
TPM4-212ENST00000590180 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 COPS7AQ9UBW8 275 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SEC14L3Q9UDX4 400 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ZNF225Q9UK10 706 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 ADAM29Q9UKF5 820 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
TPM4-212ENST00000590180 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 ICE1Q9Y2F5 2266 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 NPIPA5E9PKD4 350 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 ZNF500O60304 480 aaPredicted RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 CDH16O75309 829 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 GUCY1B2O75343 617 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 OR2J2O76002 312 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 UNC5CO95185 931 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 AIFM1O95831 613 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 DDAH2O95865 285 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 KRT4P19013 534 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 PIK3R1P27986 724 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 CRHR1P34998 444 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 DEKP35659 375 aaKnown RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 MAPK12P53778 367 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 RNF4P78317 190 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 IGLV3-21P80748 117 aaPredicted RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 PLIN5Q00G26 463 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 CCDC153Q494R4 210 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 TCHHL1Q5QJ38 904 aaPredicted RBP11.23□□□□□ -0.61
TPM4-212ENST00000590180 IL20RBQ6UXL0 311 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 ZYG11AQ6WRX3 759 aa11.23□□□□□ -0.61
TPM4-212ENST00000590180 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms