RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 NCLNQ969V3 563 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 FAM162AQ96A26 154 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 NEURL3Q96EH8 262 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 ZNF285Q96NJ3 590 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 TGM7Q96PF1 710 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 BBS4Q96RK4 519 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CXorf36Q9H7Y0 433 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 KCMF1Q9P0J7 381 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 C5AR2Q9P296 337 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 CES1P1Q9UKY3 287 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 DAPP1Q9UN19 280 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 PLCL2Q9UPR0 1127 aa11.4□□□□□ -0.58
CCBE1-203ENST00000589116 RNF103-CHMP3A0A140T963 221 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 MYO1GB0I1T2 1018 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PEX1O43933 1283 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 CER1O95813 267 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 NTRK1P04629 796 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PCGF2P35227 344 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 SOX11P35716 441 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 MAGEA8P43361 318 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 GABRA4P48169 554 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 MVDP53602 400 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 LIM2P55344 173 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 NDUFA9Q16795 377 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 DEFB110Q30KQ9 67 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 TCTE1Q5JU00 501 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 SAXO2Q658L1 398 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 C18orf63Q68DL7 685 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 OR52E8Q6IFG1 317 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 TMEM64Q6YI46 380 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PTOV1Q86YD1 416 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 EID3Q8N140 333 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 LILRA2Q8N149 483 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 ARHGEF39Q8N4T4 335 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 C11orf65Q8NCR3 313 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PNPT1Q8TCS8 783 aaKnown RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 AMDHD1Q96NU7 426 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PKP2Q99959 881 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 DPH2Q9BQC3 489 aaPredicted RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 TACO1Q9BSH4 297 aaKnown RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 UGT2B28Q9BY64 529 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 GLIPR2Q9H4G4 154 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 SIRT3Q9NTG7 399 aaPredicted RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 DCAF13Q9NV06 445 aaKnown RBP11.4□□□□□ -0.59
CCBE1-203ENST00000589116 SOHLH2Q9NX45 425 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 SEMA5BQ9P283 1151 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 AURKCQ9UQB9 309 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 C15orf41Q9Y2V0 281 aa11.4□□□□□ -0.59
CCBE1-203ENST00000589116 PCDH15Q96QU1 1955 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SDK1Q7Z5N4 2213 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 PGRMC2O15173 223 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 KIF1CO43896 1103 aaKnown RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 CAPNS1P04632 268 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 BMP2P12643 396 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 CSNK2A2P19784 350 aaPredicted RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 NCBP2P52298 156 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 OR1D5P58170 312 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 HSPB3Q12988 150 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 RUNX2Q13950 521 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SPIDRQ14159 915 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 NR0B2Q15466 257 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ADRM1Q16186 407 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 FAM98BQ52LJ0 330 aaKnown RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 GCNT6Q5T4J0 391 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SLC23A3Q6PIS1 610 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 WDR74Q6RFH5 385 aaPredicted RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 PRSS42Q7Z5A4 293 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 KMT5CQ86Y97 462 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SLC30A8Q8IWU4 369 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 TMEM102Q8N9M5 508 aaPredicted RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 FAM181AQ8N9Y4 354 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ADCY4Q8NFM4 1077 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SFXN5Q8TD22 340 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 MOAP1Q96BY2 351 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 KLHL4Q9C0H6 718 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 GAREM1Q9H706 876 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 YY1AP1Q9H869 796 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ANKHQ9HCJ1 492 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ENAMQ9NRM1 1142 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SEMA3GQ9NS98 782 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 GPATCH2Q9NW75 528 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 FAF1Q9UNN5 650 aaPredicted RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SAMD4AQ9UPU9 718 aaKnown RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 MRPS2Q9Y399 296 aaKnown RBP11.39□□□□□ -0.59
CCBE1-203ENST00000589116 SNX8Q9Y5X2 465 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ZNF780BQ9Y6R6 833 aa11.39□□□□□ -0.59
CCBE1-203ENST00000589116 ARID1BQ8NFD5 2236 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-203ENST00000589116 SCN3AQ9NY46 2000 aa11.38□□□□□ -0.59
CCBE1-203ENST00000589116 CABIN1Q9Y6J0 2220 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms