RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 MAGEA4P43358 317 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 PPIAP62937 165 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 CUL3Q13618 768 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 PCBP2Q15366 365 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 20.1
PKN1-211ENST00000588200 SPRED3Q2MJR0 410 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 GXYLT1Q4G148 440 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 FBXO48Q5FWF7 155 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 MRM1Q6IN84 353 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 CAPN12Q6ZSI9 719 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 NCCRP1Q6ZVX7 275 aaPredicted RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 CENPLQ8N0S6 344 aaPredicted RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 ZNF321PQ8N8H1 164 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 HUS1BQ8NHY5 278 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 PAQR8Q8TEZ7 354 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 RGMAQ96B86 450 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 OR8D2Q9GZM6 311 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 DPH5Q9H2P9 285 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 SACM1LQ9NTJ5 587 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.34□□□□□ -0.43
PKN1-211ENST00000588200 COPS7AQ9UBW8 275 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 PHF11Q9UIL8 331 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
PKN1-211ENST00000588200 UTP11Q9Y3A2 253 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
PKN1-211ENST00000588200 RTCAO00442 366 aaKnown RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 PLPP1O14494 284 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 PROM1O43490 865 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 DYRK3O43781 588 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 FGF17O60258 216 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 CDC40O60508 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
PKN1-211ENST00000588200 TGFB1P01137 390 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 SNRPB2P08579 225 aaKnown RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 TNNI3P19429 210 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 CPN2P22792 545 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 MSX1P28360 303 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 TLX1P31314 330 aaPredicted RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 SSR2P43308 183 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 PLTPP55058 493 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 SLAMF1Q13291 335 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 SETDB1Q15047 1291 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 ACAP2Q15057 778 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 FAM83EQ2M2I3 478 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 LYPD8Q6UX82 237 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 C3P1Q6ZMU1 363 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 TRILQ7L0X0 811 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 GPR180Q86V85 440 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 TMEM251Q8N6I4 163 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 L3MBTL4Q8NA19 623 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 RBM18Q96H35 190 aaKnown RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 ZNF717Q9BY31 904 aaPredicted RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 DEFB127Q9H1M4 99 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 DDX31Q9H8H2 851 aaKnown RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 LIN28AQ9H9Z2 209 aaKnown RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 DMRT3Q9NQL9 472 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
PKN1-211ENST00000588200 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 CNIH4Q9P003 139 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 ATG4BQ9Y4P1 393 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 IKBKGQ9Y6K9 419 aa12.33□□□□□ -0.44
PKN1-211ENST00000588200 A0A087X1B8 175 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 HMX2A2RU54 273 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 ANKRD33BA6NCL7 494 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 OR6C76A6NM76 312 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 FIGNL2A6NMB9 653 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 UBXN8O00124 270 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 FOXE1O00358 373 aaPredicted RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 WDR1O75083 606 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 NADKO95544 446 aaPredicted RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 GPR75O95800 540 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 C2P06681 752 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 ACVR2AP27037 513 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 BUD31P41223 144 aaPredicted RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 ALDH18A1P54886 795 aaKnown RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 PLIN5Q00G26 463 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 TNFRSF17Q02223 184 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 PLGLB1Q02325 96 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 TLE4Q04727 773 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 ZNF750Q32MQ0 723 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 C10orf62Q5T681 223 aaPredicted RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 SLC22A10Q63ZE4 541 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 MEX3BQ6ZN04 569 aaKnown RBP12.32□□□□□ -0.44
PKN1-211ENST00000588200 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
PKN1-211ENST00000588200 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms