RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 PRDM7Q9NQW5 492 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 TRMT1Q9NXH9 659 aaKnown RBP13□□□□□ -0.33
CXXC1-208ENST00000587170 GPRC5BQ9NZH0 403 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 CHCHD2Q9Y6H1 151 aaPredicted RBP13□□□□□ -0.33
CXXC1-208ENST00000587170 NPEPPSL1A6NEC2 478 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 WDR47O94967 919 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 HEXAP06865 529 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KCNC1P48547 511 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF136P52737 540 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 DCAF7P61962 342 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KCNJ2P63252 427 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 CRYZQ08257 329 aaKnown RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 ASPHQ12797 758 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KEAP1Q14145 624 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 CCDC137Q6PK04 289 aaKnown RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 ADAMTSL2Q86TH1 951 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KRT78Q8N1N4 520 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 SLC22A8Q8TCC7 542 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 MAGOHBQ96A72 148 aaKnown RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 KCNC2Q96PR1 638 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 PRDM14Q9GZV8 571 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 EXO5Q9H790 373 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 COPS7BQ9H9Q2 264 aaPredicted RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 CNIH4Q9P003 139 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
CXXC1-208ENST00000587170 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
CXXC1-208ENST00000587170 TUBAL3A6NHL2 446 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 ANKDD1BA6NHY2 528 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 AHRRA9YTQ3 701 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 PRAMEF4O60810 478 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 LDB3O75112 727 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 H2AFYO75367 372 aaKnown RBP12.98□□□□□ -0.33
CXXC1-208ENST00000587170 BANF1O75531 89 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 STT3AP46977 705 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 E2F2Q14209 437 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 PRAMEF9Q5VWM5 478 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF793Q6ZN11 406 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 KIF18BQ86Y91 864 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 IGDCC3Q8IVU1 814 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 NKAPQ8N5F7 415 aaKnown RBP12.98□□□□□ -0.33
CXXC1-208ENST00000587170 CCT6BQ92526 530 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
CXXC1-208ENST00000587170 FBXL20Q96IG2 436 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 EGFL8Q99944 293 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 CAPS2Q9BXY5 557 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 ROGDIQ9GZN7 287 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 LZTFL1Q9NQ48 299 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
CXXC1-208ENST00000587170 ALKBH4Q9NXW9 302 aa12.98□□□□□ -0.33
CXXC1-208ENST00000587170 CNOT11Q9UKZ1 510 aaKnown RBP12.98□□□□□ -0.33
CXXC1-208ENST00000587170 MYOCOSA0A1B0GUC4 107 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 ANKRD33BA6NCL7 494 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 TRIM3O75382 744 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 C1QAP02745 245 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 CD53P19397 219 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 CD22P20273 847 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 ATP5A1P25705 553 aaKnown RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 GGT5P36269 586 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 GDF5P43026 501 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 TGM3Q08188 693 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 FRG1Q14331 258 aaKnown RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 TSNQ15631 228 aaKnown RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 C18orf21Q32NC0 220 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 PRAMEF20Q5VT98 475 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 CXorf67Q86X51 503 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 SENP5Q96HI0 755 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 COX4I2Q96KJ9 171 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 MAPKAP1Q9BPZ7 522 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 WDR83Q9BRX9 315 aaKnown RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 TMEM79Q9BSE2 394 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 TBCDQ9BTW9 1192 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 MS4A8Q9BY19 250 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 UBQLN3Q9H347 655 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF490Q9ULM2 529 aaPredicted RBP12.97□□□□□ -0.33
CXXC1-208ENST00000587170 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 A0A1W2PPR1 153 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 MBD3L4A6NDZ8 208 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 MBD3L3A6NE82 208 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 MBD3L5A6NJ08 208 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 CD8B2A6NJW9 211 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 FGF17O60258 216 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 WISP3O95389 354 aaPredicted RBP12.96□□□□□ -0.33
CXXC1-208ENST00000587170 IL18BPO95998 194 aa12.96□□□□□ -0.33
CXXC1-208ENST00000587170 HRGP04196 525 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms