RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 AICDAQ9GZX7 198 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 CD93Q9NPY3 652 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 SIRT3Q9NTG7 399 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 TEX10Q9NXF1 929 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 VNN3Q9NY84 501 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 WSB2Q9NYS7 404 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 PDP1Q9P0J1 537 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 TMEFF2Q9UIK5 374 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 PHF11Q9UIL8 331 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 NDRG2Q9UN36 371 aaKnown RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 MRPS17Q9Y2R5 130 aaKnown RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 KLK4Q9Y5K2 254 aa10.68□□□□□ -0.7
LIG3-204ENST00000585740 MAGED1Q9Y5V3 778 aaPredicted RBP10.68□□□□□ -0.7
LIG3-204ENST00000585740 CCDC88CQ9P219 2028 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 PRAMEF33A0A0G2JMD5 474 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CCDC160A6NGH7 325 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 C2orf74A8MZ97 194 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 TNFRSF11BO00300 401 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 BTN3A3O00478 584 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 BCKDKO14874 412 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 SCAMP1O15126 338 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 NARSO43776 548 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 JRKO75564 520 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GCM2O75603 506 aaPredicted RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 DNAJB5O75953 348 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 EML2O95834 649 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ASGR2P07307 311 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CHRNB1P11230 501 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ANXA8P13928 327 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 AQP1P29972 269 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 PPP2R1BP30154 601 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CD6P30203 668 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CRYBA2P53672 197 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 KCNC4Q03721 635 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 HSPB3Q12988 150 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 SUZ12Q15022 739 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 IQCCQ4KMZ1 466 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ZNF773Q6PK81 442 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 FIGLAQ6QHK4 219 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ISLR2Q6UXK2 745 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GPR141Q7Z602 305 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GALNT10Q86SR1 603 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 NRROSQ86YC3 692 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 HS3ST5Q8IZT8 346 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ZNF655Q8N720 491 aaPredicted RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 CAMKVQ8NCB2 501 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 TSTD1Q8NFU3 115 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 OR13H1Q8NG92 308 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 OR56A1Q8NGH5 318 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CCL4L1Q8NHW4 92 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GIPC3Q8TF64 312 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 RSC1A1Q92681 617 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 TAMM41Q96BW9 452 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 TOE1Q96GM8 510 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 AMDHD1Q96NU7 426 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ZNF300Q96RE9 604 aaPredicted RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 AMBRA1Q9C0C7 1298 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 RBM38Q9H0Z9 239 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 GLIPR2Q9H4G4 154 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 KLHL31Q9H511 634 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 C6orf106Q9H6K1 298 aaPredicted RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 SLAMF7Q9NQ25 335 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GPR27Q9NS67 375 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 KRT84Q9NSB2 600 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 ACTR10Q9NZ32 417 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 P2RX2Q9UBL9 471 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 APOBEC3BQ9UH17 382 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 ENOPH1Q9UHY7 261 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 CYP8B1Q9UNU6 501 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 FAM32AQ9Y421 112 aaKnown RBP10.67□□□□□ -0.7
LIG3-204ENST00000585740 U3KQV3 271 aa10.67□□□□□ -0.7
LIG3-204ENST00000585740 GOLGA4Q13439 2230 aaKnown RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 A0A0G2JN53 185 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ZNF701M0R085 212 aaPredicted RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 SERPINB7O75635 380 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 CLIC3O95833 236 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 CTSEP14091 401 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 UGT2B7P16662 529 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 RHCEP18577 417 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PRKACGP22612 351 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 GSTT1P30711 240 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 RRM2P31350 389 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 BUD31P41223 144 aaPredicted RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 CDK9P50750 372 aaKnown RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 DAPP51397 102 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 NCBP2P52298 156 aaKnown RBP eCLIP10.66□□□□□ -0.7
LIG3-204ENST00000585740 UBE2IP63279 158 aaKnown RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 ZXDAP98168 799 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ZBED5Q49AG3 693 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 MANEAQ5SRI9 462 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 C6orf141Q5SZD1 244 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 BROXQ5VW32 411 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PRAMEF8Q5VWM4 474 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PRAMEF7Q5VXH5 474 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 SLC48A1Q6P1K1 146 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 CEP68Q76N32 757 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms