RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 UBIAD1Q9Y5Z9 338 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 APCP25054 2843 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 SPG11Q96JI7 2443 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NID2Q14112 1375 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MYH11P35749 1972 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 SCN8AQ9UQD0 1980 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HIVEP3Q5T1R4 2406 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 TACC2O95359 2948 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 IGKV6D-21A0A0A0MT36 114 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 LOC101059948A0A1B0GTJ6 334 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 A0A1W2PRB8 838 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 FRMD3A2A2Y4 597 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 BCLAF3A2AJT9 711 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 GLOD5A6NK44 160 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 A8MV72 311 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 KLLNB2CW77 178 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 I3L4J1 428 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 RTL8CO15255 209 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 OGG1O15527 345 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 STBD1O95210 358 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 PLEKHA8P1O95397 391 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 SEC24AO95486 1093 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 MT-ND3P03897 115 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CCDC175P0C221 793 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 RARGP13631 454 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 P4HA1P13674 534 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 PRG2P13727 222 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CCNE1P24864 410 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 RBMS1P29558 406 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 GDI1P31150 447 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 KIF5BP33176 963 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 GP5P40197 560 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CXCL12P48061 93 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 ALDH3A2P51648 485 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 LIMK2P53671 638 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CRYBB1P53674 252 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 NLRP11P59045 1033 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 PON2Q15165 354 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 TAF13Q15543 124 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 PCGF3Q3KNV8 242 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 FAM78AQ5JUQ0 283 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 GCNT6Q5T4J0 391 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 ERMARDQ5T6L9 678 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CNSTQ6PJW8 725 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CD300LGQ6UXG3 332 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 GLDNQ6ZMI3 551 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 Q6ZRP5 223 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CCDC186Q7Z3E2 898 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CDR2LQ86X02 465 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 METTL23Q86XA0 190 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 DNAAF5Q86Y56 855 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 LACC1Q8IV20 430 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 ARHGAP12Q8IWW6 846 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 C11orf53Q8IXP5 236 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CPSF7Q8N684 471 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 NAT8LQ8N9F0 302 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 POC5Q8NA72 575 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 HJURPQ8NCD3 748 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 PRPF31Q8WWY3 499 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 RASL10AQ92737 203 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 FAM162AQ96A26 154 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 NSL1Q96IY1 281 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CMTM3Q96MX0 182 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 MBOAT7Q96N66 472 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 WDFY2Q96P53 400 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 USP28Q96RU2 1077 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 FNBP1Q96RU3 617 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 CITED2Q99967 270 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 PI4K2AQ9BTU6 479 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 DNAI2Q9GZS0 605 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 ATP13A3Q9H7F0 1226 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 ZDHHC4Q9NPG8 344 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 PFDN4Q9NQP4 134 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.31□□□□□ -2.047e-7■■□□□ 14.3
VAPA-208ENST00000584796 PDRG1Q9NUG6 133 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 C5AR2Q9P296 337 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 SUCLA2Q9P2R7 463 aaPredicted RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 FBXL17Q9UF56 701 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 RAB23Q9ULC3 237 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 WDR37Q9Y2I8 494 aa2.31□□□□□ -2.04
VAPA-208ENST00000584796 MRPL11Q9Y3B7 192 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 ZNF106Q9H2Y7 1883 aaKnown RBP2.31□□□□□ -2.04
VAPA-208ENST00000584796 LRRK1Q38SD2 2015 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 DCHS2Q6V1P9 2916 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 IGLV3-10A0A075B6K4 115 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 FAM237BA0A1B0GVD1 139 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 CDRT15L2A8MXV6 281 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 J3QKU1 62 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 RTCAO00442 366 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 ZBTB5O15062 677 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SCAMP1O15126 338 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 HMMRO75330 724 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 PRKRAO75569 313 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 PRAMEF12O95522 483 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 IGHDP01880 384 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 POLR2MP0CAP2 368 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 DUX4L4P0CJ87 422 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 CD59P13987 128 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 DARSP14868 501 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 DESP17661 470 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms