RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 STX16O14662 325 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 PEX1O43933 1283 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 TUBB4AP04350 444 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 RPS17P08708 135 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 SNRPAP09012 282 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 ZNF24P17028 368 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 PTX3P26022 381 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 PTGER1P34995 402 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 SOX3P41225 446 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 CDH13P55290 713 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 PHEXP78562 749 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 SGO1Q5FBB7 561 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 MRM1Q6IN84 353 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 IL20RBQ6UXL0 311 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 CHERPQ8IWX8 916 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 IFT20Q8IY31 132 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 OR4F6Q8NGB9 312 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 REPS1Q96D71 796 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 DGAT2Q96PD7 388 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 RASL10BQ96S79 203 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 MRPL46Q9H2W6 279 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 EPB41L4BQ9H329 900 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 FARSBQ9NSD9 589 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 DEPPQ9NTK1 212 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 MYOTQ9UBF9 498 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 YARS2Q9Y2Z4 477 aaKnown RBP16.72■□□□□ 0.27
SRSF1-208ENST00000584773 CRYBG3Q68DQ2 2970 aa16.72■□□□□ 0.27
SRSF1-208ENST00000584773 A8MVJ9 347 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 GOLGA8RI6L899 631 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 PROM1O43490 865 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ASNA1O43681 348 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 AIFM1O95831 613 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ABHD2P08910 425 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 COL6A2P12110 1019 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 CNTFP26441 200 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 STT3AP46977 705 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 RNF4P78317 190 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 RBPJQ06330 500 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 CUL3Q13618 768 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ZNF750Q32MQ0 723 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ZNF483Q8TF39 744 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ITLN2Q8WWU7 325 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ASB15Q8WXK1 588 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 MAGED4Q96JG8 741 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 MRPL57Q9BQC6 102 aaKnown RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 NTMT1Q9BV86 223 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 TXLNGYQ9BZA5 131 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 DDX31Q9H8H2 851 aaKnown RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 HPF1Q9NWY4 346 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 TEX10Q9NXF1 929 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 TMEM216Q9P0N5 145 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 PHF11Q9UIL8 331 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 ERVK-11Q9UQG0 969 aa16.71■□□□□ 0.27
SRSF1-208ENST00000584773 KLF13Q9Y2Y9 288 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-208ENST00000584773 NOTCH2Q04721 2471 aa16.71■□□□□ 0.26
SRSF1-208ENST00000584773 FOXO6A8MYZ6 492 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 HS6ST1O60243 411 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 FAM58BPP0C7Q3 252 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 FRG2Q64ET8 278 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TTC19Q6DKK2 380 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 LETMD1Q6P1Q0 360 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 METTL2BQ6P1Q9 378 aaKnown RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 CYP20A1Q6UW02 462 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 C9orf40Q8IXQ3 194 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 SENP5Q96HI0 755 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 FRG2BQ96QU4 278 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 HBEGFQ99075 208 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 MRPL1Q9BYD6 325 aaKnown RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ZNF225Q9UK10 706 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TMCO1Q9UM00 188 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ZNF835Q9Y2P0 537 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 CDK2AP1O14519 115 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TFECO14948 347 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 PGRMC2O15173 223 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 NR2F6P10588 404 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ALOX15P16050 662 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 HERVK_113P63132 956 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ERVK-8P63133 956 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ADORA2A-AS1P86434 159 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 KRTCAP3Q53RY4 240 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TCHHL1Q5QJ38 904 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 C3P1Q6ZMU1 363 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TRMT10CQ7L0Y3 403 aaKnown RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 SPPL2CQ8IUH8 684 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 PSD4Q8NDX1 1056 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 TANKQ92844 425 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 ERVK-6Q9BXR3 956 aa16.7■□□□□ 0.26
SRSF1-208ENST00000584773 LYARQ9NX58 379 aaKnown RBP16.7■□□□□ 0.26
SRSF1-208ENST00000584773 MS4A12Q9NXJ0 267 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms