RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	PCCA	P05165	728 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ANKRD34C	P0C6C1	535 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PRSS56	P0CW18	603 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	F3	P13726	295 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CD59	P13987	128 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DARS	P14868	501 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF18	P17022	549 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RPL35A	P18077	110 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HOXD10	P28358	340 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HLA-F	P30511	346 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TIMP3	P35625	211 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TSFM	P43897	325 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	VEGFC	P49767	419 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ATP12A	P54707	1039 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CASP9	P55211	416 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DCDC1	P59894	354 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GUCY2D	Q02846	1103 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CBX3	Q13185	183 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PPIL2	Q13356	520 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ITGA9	Q13797	1035 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	EFTUD2	Q15029	972 aa	Known RBP eCLIP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF74	Q16587	644 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LBH	Q53QV2	105 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KCTD11	Q693B1	232 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TCEAL6	Q6IPX3	200 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ELMOD1	Q8N336	334 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	RTL3	Q8N8U3	475 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	UBE2Q2	Q8WVN8	375 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KRT35	Q92764	455 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ATP6V0B	Q99437	205 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NDN	Q99608	321 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CDX2	Q99626	313 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CACNG6	Q9BXT2	260 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MTHFD2L	Q9H903	347 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CD209	Q9NNX6	404 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PRMT8	Q9NR22	394 aa	Predicted RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	IL19	Q9UHD0	177 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PILRB	Q9UKJ0	227 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KCNK6	Q9Y257	313 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GVINP1	Q7Z2Y8	2422 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LTBP2	Q14767	1821 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FRMPD3	Q5JV73	1810 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PHIP	Q8WWQ0	1821 aa		3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SMG1	Q96Q15	3661 aa	Known RBP	3.21	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NCOR2	Q9Y618	2525 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF318	Q5VUA4	2279 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754		A0A087WUV0	522 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MAGEB16	A2A368	324 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754		A8MVM7	634 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PRSS46	E5RG02	174 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PDHX	O00330	501 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NTN3	O00634	580 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CCS	O14618	274 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	HSF2BP	O75031	334 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KHDRBS3	O75525	346 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SEC24A	O95486	1093 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GPI	P06744	558 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SERPINF2	P08697	491 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ANPEP	P15144	967 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GOT1	P17174	413 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CAPN2	P17655	700 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CEBPB	P17676	345 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CTNNA2	P26232	953 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CD27	P26842	260 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CHRNB4	P30926	498 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	STIP1	P31948	543 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SLC1A3	P43003	542 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ALDH3B1	P43353	468 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	KCNJ1	P48048	391 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NR0B1	P51843	470 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	B3GALT5-AS1	P59052	145 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CYCS	P99999	105 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ACTN3	Q08043	901 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TAB1	Q15750	504 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF876P	Q49A33	203 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TTC31	Q49AM3	519 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GPR33	Q49SQ1	333 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TRIM65	Q6PJ69	517 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TMEM270	Q6UE05	265 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	NHLRC1	Q6VVB1	395 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LEKR1	Q6ZMV7	388 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CHMP1B	Q7LBR1	199 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MIER3	Q7Z3K6	550 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	COX8C	Q7Z4L0	72 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PRSS42	Q7Z5A4	293 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CPEB2	Q7Z5Q1	589 aa	Known RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ERO1B	Q86YB8	467 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	TMEM126B	Q8IUX1	230 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	CARNMT1	Q8N4J0	409 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	DDHD1	Q8NEL9	900 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	OR1L3	Q8NH93	324 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	GATAD1	Q8WUU5	269 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	ZNF524	Q96C55	264 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	FAM122A	Q96E09	287 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	SENP5	Q96HI0	755 aa	Predicted RBP	3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	MAGED4	Q96JG8	741 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	LURAP1	Q96LR2	239 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	C10orf90	Q96M02	699 aa		3.2	□□□□□ -1.9
PPP4R1-229	ENST00000584754	PANX3	Q96QZ0	392 aa		3.2	□□□□□ -1.9

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