RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CYC1P08574 325 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 KRT16P08779 473 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 IFI6P09912 130 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZCCHC18P0CG32 403 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 CSNK2A2P19784 350 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 XCR1P46094 333 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 MAPK10P53779 464 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 MAT1AQ00266 395 aaKnown RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 PRSS53Q2L4Q9 553 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 C3orf38Q5JPI3 329 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 PAGE3Q5JUK9 113 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 LRIF1Q5T3J3 769 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ARHGAP40Q5TG30 622 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 C1orf189Q5VU69 101 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 REP15Q6BDI9 236 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ANKRD26P1Q6NSI1 321 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 COX15Q7KZN9 410 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZFP28Q8NHY6 868 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 UCN3Q969E3 161 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 EXOSC8Q96B26 276 aaKnown RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 KLHL29Q96CT2 875 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 SLC7A6OSQ96CW6 309 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZNF681Q96N22 645 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ULBP3Q9BZM4 244 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 LANCL2Q9NS86 450 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 SLC22A11Q9NSA0 550 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 TRPC4Q9UBN4 977 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-216ENST00000582885 PCDHGB4Q9UN71 923 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 B3GALT1Q9Y5Z6 326 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 ZNF780BQ9Y6R6 833 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 MAU2Q9Y6X3 613 aa11.3□□□□□ -0.6
CCDC57-216ENST00000582885 A0A096LPI6 279 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 GLOD5A6NK44 160 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 VSTM2BA6NLU5 285 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 C9orf172C9J069 976 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 FAM227AF5H4B4 570 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 AIM2O14862 343 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 NVLO15381 856 aaKnown RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 SLITRK5O94991 958 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 KCNH1O95259 989 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 DLGAP3O95886 979 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CD63P08962 238 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 ZNF28P17035 718 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PTPN4P29074 926 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 NTSP30990 170 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 MPIP34949 423 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CPOXP36551 454 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CPA2P48052 419 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 NUDT2P50583 147 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 ART3Q13508 389 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 MAP7Q14244 749 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 SYT16Q17RD7 645 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CPZQ66K79 652 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 SLC2A7Q6PXP3 512 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 DLEU7Q6UYE1 221 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 QSOX2Q6ZRP7 698 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 SCUBE1Q8IWY4 988 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PSMA8Q8TAA3 256 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 OR5P2Q8WZ92 322 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PMEPA1Q969W9 287 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CIDECQ96AQ7 238 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 CNRIP1Q96F85 164 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 BBS4Q96RK4 519 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 NPAS2Q99743 824 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 HOPXQ9BPY8 73 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PAIP1Q9H074 479 aaKnown RBP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 WDR54Q9H977 334 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 PRTFDC1Q9NRG1 225 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 C14orf105Q9NVL8 296 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC57-216ENST00000582885 TAS2R9Q9NYW1 312 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 C5AR2Q9P296 337 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 ENTPD4Q9Y227 616 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 GMEB1Q9Y692 573 aa11.29□□□□□ -0.6
CCDC57-216ENST00000582885 TRBV5-3A0A0A0MS03 114 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 WASHC1A8K0Z3 465 aa11.28□□□□□ -0.6
CCDC57-216ENST00000582885 FXYD1O00168 92 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms