RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CMTM7Q96FZ5 175 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 MAPKAP1Q9BPZ7 522 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 PELOQ9BRX2 385 aaKnown RBP16.53■□□□□ 0.24
MKS1-209ENST00000580127 ZFP64Q9NPA5 681 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 ATG4BQ9Y4P1 393 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
MKS1-209ENST00000580127 CAPN14A8MX76 684 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 AHRRA9YTQ3 701 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 SYT5O00445 386 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 DVL2O14641 736 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 TAPBPO15533 448 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 CCNT2O60583 730 aaKnown RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 CCL3P10147 92 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 STMN1P16949 149 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 HIST1H1TP22492 207 aaPredicted RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 CASP2P42575 452 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 SSR2P43308 183 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 STT3AP46977 705 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 PLIN5Q00G26 463 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 FOXO1Q12778 655 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 RTL6Q6ICC9 239 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 MED27Q6P2C8 311 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 SLC29A4Q7RTT9 530 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 VN1R5Q7Z5H4 357 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 TGIF2LYQ8IUE0 185 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 ZZZ3Q8IYH5 903 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 ZNF721Q8TF20 911 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 PYROXD1Q8WU10 500 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 RGMAQ96B86 450 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 RMND5BQ96G75 393 aaPredicted RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 TMUB1Q9BVT8 246 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 CD244Q9BZW8 370 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 RPF2Q9H7B2 306 aaKnown RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 ACKR4Q9NPB9 350 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 PHF11Q9UIL8 331 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 FOXD3Q9UJU5 478 aaPredicted RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 PTBP2Q9UKA9 531 aaKnown RBP16.52■□□□□ 0.24
MKS1-209ENST00000580127 RNF112Q9ULX5 631 aa16.52■□□□□ 0.24
MKS1-209ENST00000580127 NAV3Q8IVL0 2385 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 NINQ8N4C6 2090 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 DIAPH2O60879 1101 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 ETHE1O95571 254 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 PCNAP12004 261 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 UQCRC1P31930 480 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 PIGAP37287 484 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 NR0B1P51843 470 aaKnown RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 RAP1GDS1P52306 607 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 ZNF791Q3KP31 576 aaPredicted RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 OR4C11Q6IEV9 310 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 TAGAPQ8N103 731 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 ZNF321PQ8N8H1 164 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 FAM13CQ8NE31 585 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 STAG3L4Q8TBR4 150 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 PAQR8Q8TEZ7 354 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 FAM222BQ8WU58 562 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 ANKRD9Q96BM1 317 aaPredicted RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 SPACA9Q96E40 222 aaPredicted RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 MS4A8Q9BY19 250 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 CXXC4Q9H2H0 198 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 CLEC4MQ9H2X3 399 aaPredicted RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 CCM2LQ9NUG4 571 aaPredicted RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 MTRF1LQ9UGC7 380 aaKnown RBP16.51■□□□□ 0.23
MKS1-209ENST00000580127 ST6GALNAC2Q9UJ37 374 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 LIPGQ9Y5X9 500 aa16.51■□□□□ 0.23
MKS1-209ENST00000580127 PRRC2AP48634 2157 aaKnown RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 AKAP6Q13023 2319 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 MAP1AP78559 2803 aaPredicted RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 TP53I11O14683 189 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 SEC31AO94979 1220 aaKnown RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 TBX6O95947 436 aaPredicted RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 TGFB1P01137 390 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 CELA3AP09093 270 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 DGKQP52824 942 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 DLX5P56178 289 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 ID2Q02363 134 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 TBCELQ5QJ74 424 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 FBXW10Q5XX13 1052 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 TMEM198Q66K66 360 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 LRRC70Q7Z2Q7 622 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 MAATS1Q7Z4T9 603 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 CAMKMTQ7Z624 323 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 GPR180Q86V85 440 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 KIF18BQ86Y91 864 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 ZBED8Q8IZ13 594 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 SPATA6LQ8N4H0 392 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 ZNF473Q8WTR7 871 aaKnown RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 ESAMQ96AP7 390 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 FBXL20Q96IG2 436 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 JSRP1Q96MG2 331 aaPredicted RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 CPNE1Q99829 537 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 TMEM79Q9BSE2 394 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 CNPPD1Q9BV87 410 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 MTO1Q9Y2Z2 717 aaKnown RBP16.5■□□□□ 0.23
MKS1-209ENST00000580127 NF1P21359 2839 aa16.5■□□□□ 0.23
MKS1-209ENST00000580127 ARHGAP21Q5T5U3 1957 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 EFCAB8A8MWE9 144 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms