RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 AQP12AQ8IXF9 295 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 CNRIP1Q96F85 164 aaPredicted RBP17.51■□□□□ 0.39
PRKCA-203ENST00000578063 RSRC1Q96IZ7 334 aaKnown RBP17.51■□□□□ 0.39
PRKCA-203ENST00000578063 CNDP2Q96KP4 475 aaKnown RBP17.51■□□□□ 0.39
PRKCA-203ENST00000578063 TRIM4Q9C037 500 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 SPRTNQ9H040 489 aaPredicted RBP17.51■□□□□ 0.39
PRKCA-203ENST00000578063 GLIPR2Q9H4G4 154 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 SYNDIG1Q9H7V2 258 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 CXorf36Q9H7Y0 433 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 S100A14Q9HCY8 104 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 CLCA2Q9UQC9 943 aa17.51■□□□□ 0.39
PRKCA-203ENST00000578063 A0A0A6YYC8 382 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 H3BMH7 237 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 I3L1I5 382 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CASC3O15234 703 aaKnown RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 FOXS1O43638 330 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 LDOC1O95751 146 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 C8BP07358 591 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CKMT2P17540 419 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GGT1P19440 569 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 MPIP34949 423 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CHI3L1P36222 383 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ITGA1P56199 1179 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SHC2P98077 582 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 VAC14Q08AM6 782 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CYP51A1Q16850 503 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ERICH5Q6P6B1 374 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 TLDC1Q6P9B6 456 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CYP2R1Q6VVX0 501 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 PRR23CQ6ZRP0 262 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 TMPRSS9Q7Z410 1059 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ARHGAP22Q7Z5H3 698 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 MICU2Q8IYU8 434 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GPR135Q8IZ08 494 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GOLM1Q8NBJ4 401 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 OR5T3Q8NGG3 340 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 OR52N2Q8NGI0 321 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 USP22Q9UPT9 525 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SNX8Q9Y5X2 465 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 IGHV5-10-1A0A0J9YXX1 117 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 TCRBV3S1A0A5B6 114 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 H0YIG0 161 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CYR61O00622 381 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 DNAJB6O75190 326 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 MED26O95402 600 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GP1BAP07359 652 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 FOLR1P15328 257 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GPC1P35052 558 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 MRPS22P82650 360 aaKnown RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 RHDQ02161 417 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ACY1Q03154 408 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 FADDQ13158 208 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 YOD1Q5VVQ6 348 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CPZQ66K79 652 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ANGPTL8Q6UXH0 198 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 DTWD1Q8N5C7 304 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SUMF1Q8NBK3 374 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 OR4K14Q8NGD5 310 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 OR1L3Q8NH93 324 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 PNPT1Q8TCS8 783 aaKnown RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 PYDC1Q8WXC3 89 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 MVB12AQ96EY5 273 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ZNF681Q96N22 645 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 GFM1Q96RP9 751 aaKnown RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 DPH2Q9BQC3 489 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SEMA3GQ9NS98 782 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SIRT3Q9NTG7 399 aaPredicted RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 CUTCQ9NTM9 273 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 STX18Q9P2W9 335 aaKnown RBP17.5■□□□□ 0.39
PRKCA-203ENST00000578063 SERTAD3Q9UJW9 196 aa17.5■□□□□ 0.39
PRKCA-203ENST00000578063 ZNF318Q5VUA4 2279 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 ASXL3Q9C0F0 2248 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 BLACEA4D250 179 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 WASHC1A8K0Z3 465 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 GSTA4O15217 222 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 CHST10O43529 356 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 NTRK1P04629 796 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 RNH1P13489 461 aaKnown RBP17.49■□□□□ 0.39
PRKCA-203ENST00000578063 ACP1P24666 158 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 CDK9P50750 372 aaKnown RBP17.49■□□□□ 0.39
PRKCA-203ENST00000578063 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
PRKCA-203ENST00000578063 RGNQ15493 299 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 SPDYE7PQ495Y7 208 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 MTX3Q5HYI7 312 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 GLYATQ6IB77 296 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 TMEM64Q6YI46 380 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 C10orf111Q8N326 155 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 SUN3Q8TAQ9 357 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 RHBDD1Q8TEB9 315 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 TANKQ92844 425 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 ZNF501Q96CX3 271 aaPredicted RBP17.49■□□□□ 0.39
PRKCA-203ENST00000578063 CCDC74BQ96LY2 380 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 PRRX2Q99811 253 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 FGF21Q9NSA1 209 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 FTSJ1Q9UET6 329 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 ACSL6Q9UKU0 697 aa17.49■□□□□ 0.39
PRKCA-203ENST00000578063 RP1P56715 2156 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 NTN3O00634 580 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms