RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GRSF1Q12849 480 aaKnown RBP eCLIP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 TOR1AIP1Q5JTV8 583 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ZBTB46Q86UZ6 589 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 TMEM168Q9H0V1 697 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 PRDM7Q9NQW5 492 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF624Q9P2J8 865 aaPredicted RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 FBXW2Q9UKT8 454 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 WBP11Q9Y2W2 641 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ATG4BQ9Y4P1 393 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 PCDHGA6Q9Y5G7 932 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 PRAMEF27A3QJZ7 478 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ANHXE9PGG2 379 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 WBP4O75554 376 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ERAL1O75616 437 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 TFPTP0C1Z6 253 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 CERS1P27544 350 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 CD6P30203 668 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 GRK3P35626 688 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 GP2P55259 537 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 EMX1Q04741 257 aaPredicted RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ARMC8Q8IUR7 673 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ENTHD1Q8IYW4 607 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 GPR32P1Q8NGA4 272 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 RPLP0P6Q8NHW5 317 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 APH1BQ8WW43 257 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF347Q96SE7 839 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 PITX2Q99697 317 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 ACER3Q9NUN7 267 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 APOBEC3BQ9UH17 382 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 GON4LQ3T8J9 2241 aa22.42■■□□□ 1.18
NPLOC4-217ENST00000574897 A0A1W2PR48 441 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 C5orf58C9J3I9 102 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 E9PQ18 207 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 FAM227AF5H4B4 570 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 KRT20P35900 424 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 ELOAQ14241 798 aaKnown RBP22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 C18orf63Q68DL7 685 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 TSPYL5Q86VY4 417 aaPredicted RBP22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 ACOT4Q8N9L9 421 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 MUL1Q969V5 352 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 AMDHD1Q96NU7 426 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 WFDC6Q9BQY6 131 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 GABARAPL3Q9BY60 117 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 A4GALTQ9NPC4 353 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 LRP4O75096 1905 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 BTN3A3O00478 584 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 C8orf89P0DMQ9 161 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 ACADMP11310 421 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 LIM2P55344 173 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 SLC35A2P78381 396 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 NPTX1Q15818 432 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 SYPL1Q16563 259 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 ABHD17CQ6PCB6 329 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 HMGN2P46Q86SG4 172 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 LCN9Q8WX39 176 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 WARS2Q9UGM6 360 aaKnown RBP22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 NCKAP1Q9Y2A7 1128 aa22.41■■□□□ 1.18
NPLOC4-217ENST00000574897 KCNJ13O60928 360 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 DNAJB5O75953 348 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 ZBTB11O95625 1053 aaPredicted RBP22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 OR12D1P0DN82 309 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 HIST1H1TP22492 207 aaPredicted RBP22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 HTR1BP28222 390 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 GPC1P35052 558 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 NFATC4Q14934 902 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 GPR19Q15760 415 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 MICAQ29983 383 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 ADPRMQ3LIE5 342 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 AMIGO1Q86WK6 493 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 TTLQ8NG68 377 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 FAR1Q8WVX9 515 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 GAB3Q8WWW8 586 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 PIP5K1AQ99755 562 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 SLC35C2Q9NQQ7 365 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 ASB4Q9Y574 426 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 PCDHGA4Q9Y5G9 962 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 PCDHGA10Q9Y5H3 936 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 MAN2B1O00754 1011 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 FFAR1O14842 300 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 IFNA14P01570 189 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 CHRM5P08912 532 aaPredicted RBP22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 ACTR1BP42025 376 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 NCBP2P52298 156 aaKnown RBP eCLIP22.4■■□□□ 1.189e-8■■■□□ 15.3
NPLOC4-217ENST00000574897 ACTR1AP61163 376 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 SLC9A5Q14940 896 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 TRIM73Q86UV7 250 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 FRMD1Q8N878 549 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 APOBEC4Q8WW27 367 aaKnown RBP22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 HRASLS5Q96KN8 279 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 YIPF4Q9BSR8 244 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 DUSP21Q9H596 190 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 KIR3DX1Q9H7L2 352 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 TIMMDC1Q9NPL8 285 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 RNF6Q9Y252 685 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 ENPP4Q9Y6X5 453 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 HSPE1-MOB4S4R3N1 261 aa22.4■■□□□ 1.18
NPLOC4-217ENST00000574897 SEMA7AO75326 666 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 RASGRP1O95267 797 aa22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 ZNF182P17025 639 aaPredicted RBP22.39■■□□□ 1.18
NPLOC4-217ENST00000574897 JUNDP17535 347 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms