RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NDST2P52849 883 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 EMP2P54851 167 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KCNK10P57789 538 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 HERV-K104P63124 156 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 IRF8Q02556 426 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GRIK2Q13002 908 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MSLNQ13421 630 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GAB1Q13480 694 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GANABQ14697 944 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MFSD13AQ14CX5 517 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 R3HDM1Q15032 1099 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NPTX1Q15818 432 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ETFDHQ16134 617 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MOGQ16653 247 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 XKR4Q5GH76 650 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ARL13AQ5H913 290 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 AGBL4Q5VU57 503 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MFSD14CQ5VZR4 134 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TTC33Q6PID6 262 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KCNIP4Q6PIL6 250 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PLXDC2Q6UX71 529 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF517Q6ZMY9 492 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PLEKHG7Q6ZR37 379 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC35D2Q76EJ3 337 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PAGE2Q7Z2X7 111 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KMT5CQ86Y97 462 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ADHFE1Q8IWW8 467 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 PARP16Q8N5Y8 322 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 C12orf76Q8N812 135 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 OR7G2Q8NG99 324 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 FEZF2Q8TBJ5 459 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF398Q8TD17 642 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NRGNQ92686 78 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MAP4K1Q92918 833 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 LHX4Q969G2 390 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ZG16BQ96DA0 208 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 RAB39BQ96DA2 213 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ECHDC3Q96DC8 303 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CCDC120Q96HB5 630 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 LOXL4Q96JB6 756 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 SERAC1Q96JX3 654 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TGM7Q96PF1 710 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 SNX18Q96RF0 628 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TESK2Q96S53 571 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MMS19Q96T76 1030 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GPHA2Q96T91 129 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 C16orf70Q9BSU1 422 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 AMBRA1Q9C0C7 1298 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 OR2B2Q9GZK3 357 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KCNN2Q9H2S1 579 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 DPAGT1Q9H3H5 408 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MARCH7Q9H992 704 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC38A10Q9HBR0 1119 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MYOZ2Q9NPC6 264 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 GAR1Q9NY12 217 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ADA2Q9NZK5 511 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 SLAMF8Q9P0V8 285 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 IFNKQ9P0W0 207 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 HSFX1Q9UBD0 423 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 LCMT1Q9UIC8 334 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 NAGKQ9UJ70 344 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF229Q9UJW7 825 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ABCG2Q9UNQ0 655 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 EXOGQ9Y2C4 368 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KCTD3Q9Y597 815 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 KLK4Q9Y5K2 254 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 MST1RQ04912 1400 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 ZMYM6O95789 1325 aa4.69□□□□□ -1.66
TOPBP1-210ENST00000572787 TRAV24A0A0B4J272 114 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PRAMEF33A0A0G2JMD5 474 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SCO2A0A1W2PP80 73 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 EIF4E1BA6NMX2 242 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 I6L893 689 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SGK494L7N484 410 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 M0QZ24 198 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 LEFTY2O00292 366 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 P2RY10O00398 339 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC16A5O15375 505 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 RS1O15537 224 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PLPP2O43688 288 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 BUD23O43709 281 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PSPNO60542 156 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PRAMEF10O60809 474 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SEMA3DO95025 777 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 EFEMP2O95967 443 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 C1QTNF9P0C862 333 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 OCMP0CE72 109 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 B4GALT1P15291 398 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TAL1P17542 331 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 P2RY2P41231 377 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CDKN2CP42773 168 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CASP4P49662 377 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CEBPGP53567 150 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ERVFRD-1P60508 538 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 UBE2G2P60604 165 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms