RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PDLIM5Q96HC4 596 aaKnown RBP18.25■□□□□ 0.51
CCDC40-206ENST00000572083 MAPKAP1Q9BPZ7 522 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 PROK2Q9HC23 129 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 ACKR4Q9NPB9 350 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 LZTFL1Q9NQ48 299 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 VWA7Q9Y334 891 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 EEF1E1-BLOC1S5C9J1V9 151 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 EEF1E1O43324 174 aaKnown RBP18.24■□□□□ 0.51
CCDC40-206ENST00000572083 LY6G6DO95868 133 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 IL2RAP01589 272 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF37AP17032 561 aaPredicted RBP18.24■□□□□ 0.51
CCDC40-206ENST00000572083 GDF1P27539 372 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 GSTM2P28161 218 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 SLC6A12P48065 614 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 DUSP8Q13202 625 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF460Q14592 562 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 SPANXN3Q5MJ09 141 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
CCDC40-206ENST00000572083 GALNT7Q86SF2 657 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 KIF18BQ86Y91 864 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 PPIL6Q8IXY8 311 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 OR10G3Q8NGC4 313 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 NUBPLQ8TB37 319 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 F2RL3Q96RI0 385 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 YIPF4Q9BSR8 244 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 RBSNQ9H1K0 784 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 EPB41L4BQ9H329 900 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 QPCTLQ9NXS2 382 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 OARD1Q9Y530 152 aa18.24■□□□□ 0.51
CCDC40-206ENST00000572083 A0A1W2PPR1 153 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 NCF1BA6NI72 391 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 NCF1CA8MVU1 366 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 AHRRA9YTQ3 701 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 HRKO00198 91 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 TTC4O95801 387 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 NCF1P14598 390 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 HPDP32754 393 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 TIMP3P35625 211 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 HNMTP50135 292 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 CDKL1Q00532 357 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 CRYZQ08257 329 aaKnown RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 TSNQ15631 228 aaKnown RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 MSS51Q4VC12 460 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 TEDDM1Q5T9Z0 273 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF793Q6ZN11 406 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 FRA10AC1Q70Z53 315 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 OR4N5Q8IXE1 308 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 ANKRD9Q96BM1 317 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 HSPBAP1Q96EW2 488 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 DOHHQ9BU89 302 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 PRDM7Q9NQW5 492 aa18.23■□□□□ 0.51
CCDC40-206ENST00000572083 BEX4Q9NWD9 120 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 CORO1CQ9ULV4 474 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 CHCHD2Q9Y6H1 151 aaPredicted RBP18.23■□□□□ 0.51
CCDC40-206ENST00000572083 HRGP04196 525 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 IGKV3-11P04433 115 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 COX7A2P14406 83 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 PCSK6P29122 969 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 SORDQ00796 357 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 FBXO48Q5FWF7 155 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 SHEQ5VZ18 495 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 IGDCC3Q8IVU1 814 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 DOK4Q8TEW6 326 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 RHBDF1Q96CC6 855 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 SENP5Q96HI0 755 aaPredicted RBP18.22■□□□□ 0.51
CCDC40-206ENST00000572083 MS4A14Q96JA4 679 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 DGAT2Q96PD7 388 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 GAL3ST4Q96RP7 486 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 TIMP4Q99727 224 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
CCDC40-206ENST00000572083 NT5DC2Q9H857 520 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 PLAC1Q9HBJ0 212 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 LYRM4Q9HD34 91 aa18.22■□□□□ 0.51
CCDC40-206ENST00000572083 FAM171A2A8MVW0 826 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 RTCAO00442 366 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 FGF17O60258 216 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 PRAMEF4O60810 478 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 KCNC1P48547 511 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 TGM3Q08188 693 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 TBL3Q12788 808 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 Q5PR19 223 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 RNASEH2BQ5TBB1 312 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 PRAMEF9Q5VWM5 478 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 DGAT2L6Q6ZPD8 337 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 UBE3DQ7Z6J8 389 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 CXorf67Q86X51 503 aaPredicted RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 CIARTQ8N365 385 aaPredicted RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 RASGEF1CQ8N431 466 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 PPWD1Q96BP3 646 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF597Q96LX8 424 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 KCNC2Q96PR1 638 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 TRIB1Q96RU8 372 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 REPIN1Q9BWE0 567 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 CNIH4Q9P003 139 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 CNOT11Q9UKZ1 510 aaKnown RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF490Q9ULM2 529 aaPredicted RBP18.21■□□□□ 0.51
CCDC40-206ENST00000572083 CAMK2AQ9UQM7 478 aa18.21■□□□□ 0.51
CCDC40-206ENST00000572083 FREM3P0C091 2139 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 NINQ8N4C6 2090 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 SH3BGRLO75368 114 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms