RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EDEM1Q92611 657 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NOX1Q9Y5S8 564 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SPATA31C2B4DYI2 1134 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NME4O00746 187 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 PCDH7O60245 1069 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MAGEB1P43366 347 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NUDT6P53370 316 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SNRPD2P62316 118 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MAPK14Q16539 360 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 GPAT4Q86UL3 456 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CHTF18Q8WVB6 975 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SEC22CQ9BRL7 303 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 AKIP1Q9NQ31 210 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 A0A1W2PS29 197 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 GAPDHSO14556 408 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 CD48P09326 243 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 HOXB1P14653 301 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 JUNDP17535 347 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 CSNK2A2P19784 350 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 ATP5A1P25705 553 aaKnown RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 GIPRP48546 466 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 MTNR1BP49286 362 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 GPR143P51810 404 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 UFM1P61960 85 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 SORDQ00796 357 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 BCL2A1Q16548 175 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 LIPKQ5VXJ0 399 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 HBMQ6B0K9 141 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 DPPA2Q7Z7J5 298 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 IQCHQ86VS3 1027 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 ADGRF3Q8IZF5 1079 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 KCNRGQ8N5I3 272 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 SUMF2Q8NBJ7 301 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 DBF4BQ8NFT6 615 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF417Q8TAU3 575 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 OR5P2Q8WZ92 322 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 NT5C3BQ969T7 300 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 LIN37Q96GY3 246 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 FCRL2Q96LA5 508 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 SENP8Q96LD8 212 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 MTERF1Q99551 399 aaKnown RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 DOK1Q99704 481 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 ACBD6Q9BR61 282 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 SPNS1Q9H2V7 528 aa6.84□□□□□ -1.32
CNOT1-216ENST00000569240 RANGRFQ9HD47 186 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 LYRM2Q9NU23 88 aaPredicted RBP6.84□□□□□ -1.32
CNOT1-216ENST00000569240 ABHD14A-ACY1A0A1B0GW23 586 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 A8MXE2 369 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 CACNB4O00305 520 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 PRRG1O14668 218 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ALPPL2P10696 532 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 AQP1P29972 269 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 PRSS3P35030 304 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 HTR3AP46098 478 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 CLCN3P51790 818 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ERVFC1P60507 584 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 S100A10P60903 97 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ADARB1P78563 741 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 NRG1Q02297 640 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 RBMS2Q15434 407 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 PAN3Q58A45 887 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 C22orf42Q6IC83 251 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 BRAT1Q6PJG6 821 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 OR4K2Q8NGD2 314 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SORCS1Q8WY21 1168 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 DUSP22Q9NRW4 184 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 TXNL4BQ9NX01 149 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SPHK1Q9NYA1 384 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 FKBPLQ9UIM3 349 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 MAP4K5Q9Y4K4 846 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 RBM7Q9Y580 266 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 AIPO00170 330 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 FADS1O60427 444 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 FARS2O95363 451 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 GOT2P00505 430 aaKnown RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 EGFP01133 1207 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF20P17024 532 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 PSEN2P49810 448 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ALG10Q5BKT4 473 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 DCUN1D3Q8IWE4 304 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 OR2L5Q8NG80 312 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 OR5B17Q8NGF7 314 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 IL12RB2Q99665 862 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SLC25A21Q9BQT8 299 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 BEX2Q9BXY8 128 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 TCEAL2Q9H3H9 227 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-216ENST00000569240 OR10H1Q9Y4A9 318 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 TPOP07202 933 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 CD9P21926 228 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 GABRA5P31644 462 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 SLC1A3P43003 542 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 PRKAG1P54619 331 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 CDH8P55286 799 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 TAS2R20P59543 309 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 CHAF1BQ13112 559 aa6.83□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF627Q7L945 461 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms