RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 GFI1Q99684 422 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF577Q9BSK1 485 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 GCOM2Q9BZD3 368 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAB6CQ9H0N0 254 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CHMP4BQ9H444 224 aaKnown RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RWDD1Q9H446 243 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 FKRPQ9H9S5 495 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 LY9Q9HBG7 655 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SYTL2Q9HCH5 934 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 EQTNQ9NQ60 294 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 NRBP2Q9NSY0 501 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TRPC4Q9UBN4 977 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPASTQ9UBP0 616 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 ERRFI1Q9UJM3 462 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SNX7Q9UNH6 387 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 AURKCQ9UQB9 309 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 B3GALT5Q9Y2C3 310 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 IKBKGQ9Y6K9 419 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CLCA3PQ9Y6N3 262 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PTPRDP23468 1912 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TCHHQ07283 1943 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 OTOGLQ3ZCN5 2332 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CACNA1GO43497 2377 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 EPG5Q9HCE0 2579 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 HELZP42694 1942 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 LAMA1P25391 3075 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPAG17Q6Q759 2223 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CEP250Q9BV73 2442 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 IGLV5-45A0A087WSX0 123 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ANTXRLA6NF34 631 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ARL5CA6NH57 179 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CASTOR2A6NHX0 329 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 KPNA7A9QM74 516 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 DVL1O14640 695 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 MAGEB2O15479 319 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 TTI1O43156 1089 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 EDIL3O43854 480 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 EXTL3O43909 919 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRAMEF11O60813 436 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CTSVO60911 334 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 MED24O75448 989 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 STBD1O95210 358 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PTBP3O95758 552 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 KRT13P13646 458 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 VCLP18206 1134 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 LBPP18428 481 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ANOS1P23352 680 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 NR2F2P24468 414 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 U2AF2P26368 475 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 TIA1P31483 386 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 GABRA5P31644 462 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR1D2P34982 312 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SERPINB6P35237 376 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SOAT1P35610 550 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 AHRP35869 848 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 DCTP40126 519 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRPHP41219 470 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 WNT5AP41221 380 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCR2P41597 374 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CXCL12P48061 93 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC26A2P50443 739 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 NOVA1P51513 510 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 DVL1P1P54792 670 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 UCP2P55851 309 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 GMFBP60983 142 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRKCEQ02156 737 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PON2Q15165 354 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 IQCCQ4KMZ1 466 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 AARDQ4LEZ3 155 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 MDH1BQ5I0G3 518 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM78AQ5JUQ0 283 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 RNASEH2BQ5TBB1 312 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRAMEF8Q5VWM4 474 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 FUT10Q6P4F1 479 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PODNL1Q6PEZ8 512 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM198BQ6UWH4 519 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PLXDC2Q6UX71 529 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 VITQ6UXI7 678 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PIWIL4Q7Z3Z4 852 aaKnown RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 DEFB124Q8NES8 71 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR52E1Q8NGJ3 308 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 NCOA7Q8NI08 942 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM3CQ92520 227 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PHF21AQ96BD5 680 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF501Q96CX3 271 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 OTUB1Q96FW1 271 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ST6GAL2Q96JF0 529 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SEMA3CQ99985 751 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPZ1Q9BXG8 430 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 DPH5Q9H2P9 285 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 POLD4Q9HCU8 107 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 CHMP1AQ9HD42 196 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRMT8Q9NR22 394 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 PNPLA3Q9NST1 481 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF624Q9P2J8 865 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 KLK13Q9UKR3 277 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 RNF150Q9ULK6 438 aa3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 NAP1L2Q9ULW6 460 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P6-201ENST00000569046 GAB2Q9UQC2 676 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms