RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CDK16Q00536 496 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 FUT7Q11130 342 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 TCTN1Q2MV58 587 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 PARP6Q2NL67 630 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 EMC4Q5J8M3 183 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 WLSQ5T9L3 541 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 GRTP1Q5TC63 336 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 PRSS55Q6UWB4 352 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-205ENST00000566136 ARSKQ6UWY0 536 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 ARID3BQ8IVW6 561 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-205ENST00000566136 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 ZNF398Q8TD17 642 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 RIT1Q92963 219 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 REPS1Q96D71 796 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 MTBPQ96DY7 904 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
UBFD1-205ENST00000566136 KLHL32Q96NJ5 620 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 TMEM209Q96SK2 561 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 MRPL1Q9BYD6 325 aaKnown RBP10.11□□□□□ -0.79
UBFD1-205ENST00000566136 NOL11Q9H8H0 719 aaKnown RBP10.11□□□□□ -0.79
UBFD1-205ENST00000566136 MGAT4CQ9UBM8 478 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 TRANK1O15050 2925 aa10.11□□□□□ -0.79
UBFD1-205ENST00000566136 A6NNC1 897 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 HHLA1C9JL84 531 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 F8W810 466 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 RSL1D1O76021 490 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ARHGEF15O94989 841 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ALDOAP04075 364 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CA3P07451 260 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 PRKAR1AP10644 381 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SRFP11831 508 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 MLNP12872 115 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 FAHP16930 419 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CD52P31358 61 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SERPINB9P50453 376 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 RPL10AP62906 217 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 BHLHA9Q7RTU4 235 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 DPF1Q92782 380 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 OTUB1Q96FW1 271 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 THOC3Q96J01 351 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 RTP3Q9BQQ7 232 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ALKBH7Q9BT30 221 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 GPR87Q9BY21 358 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 PPIL3Q9H2H8 161 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ZFP14Q9HCL3 533 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CNGB3Q9NQW8 809 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 KLHL1Q9NR64 748 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 TMLHEQ9NVH6 421 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 IQCF5A8MTL0 148 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 RFXAPO00287 272 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CLN5O75503 358 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 MBP02144 154 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ZNF8P17098 575 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 ITGAXP20702 1163 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SLC6A2P23975 617 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CRHR1P34998 444 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SLC19A1P41440 591 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SLC6A12P48065 614 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 PPIDQ08752 370 aaKnown RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SEMA3BQ13214 749 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 TEX44Q53QW1 395 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 N4BP2L1Q5TBK1 243 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-205ENST00000566136 FAM180AQ6UWF9 173 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 BEND4Q6ZU67 534 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 TAC4Q86UU9 113 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 PDZD8Q8NEN9 1154 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SMARCD1Q96GM5 515 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 BTBD9Q96Q07 612 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 MDFIQ99750 246 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 NMUR2Q9GZQ4 415 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 OR10A5Q9H207 317 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SCUBE2Q9NQ36 999 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 CDH9Q9ULB4 789 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 HCFC2Q9Y5Z7 792 aa10.1□□□□□ -0.79
UBFD1-205ENST00000566136 SF3B1O75533 1304 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 LYPLA1O75608 230 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 B3GAT3O94766 335 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 IPO13O94829 963 aaKnown RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 ANP32DO95626 131 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 EFEMP2O95967 443 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 BPGMP07738 259 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 GM2AP17900 193 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 ITGB6P18564 788 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 ETV5P41161 510 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 HSD11B2P80365 405 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 PDE1BQ01064 536 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 FOXM1Q08050 763 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 UPP1Q16831 310 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 NDUFAF7Q7L592 441 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 ARMC10Q8N2F6 343 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 FADS6Q8N9I5 356 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 DNAAF3Q8N9W5 541 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBFD1-205ENST00000566136 NLKQ9UBE8 527 aa10.09□□□□□ -0.79
UBFD1-205ENST00000566136 NKX1-2Q9UD57 310 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms