RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	HEATR4	Q86WZ0	1026 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC44A2	Q8IWA5	706 aa	Predicted RBP	12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	NEURL3	Q96EH8	262 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	LINC00615	Q96LM1	132 aa	Predicted RBP	12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	SDHC	Q99643	169 aa	Predicted RBP	12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	MIEF1	Q9NQG6	463 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	NDOR1	Q9UHB4	597 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	PCDHGB6	Q9Y5F9	930 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	SNX8	Q9Y5X2	465 aa		12.52	□□□□□ -0.41
SCAPER-215	ENST00000565507	CCRL2	O00421	344 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	PLPP1	O14494	284 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	B4GALT2	O60909	372 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	GPX5	O75715	221 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	MFN2	O95140	757 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	SNX4	O95219	450 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	CISD3	P0C7P0	127 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	TP53BP2	Q13625	1128 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	NFE2L1	Q14494	772 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	TCTN3	Q6NUS6	607 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	FAM46D	Q8NEK8	389 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	SETD7	Q8WTS6	366 aa	Known RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	OPALIN	Q96PE5	141 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	NLN	Q9BYT8	704 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	ABCG4	Q9H172	646 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	CLN6	Q9NWW5	311 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	SPATA7	Q9P0W8	599 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	LSM2	Q9Y333	95 aa	Known RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	LAMA1	P25391	3075 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	CCDC88C	Q9P219	2028 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	MN1	Q10571	1320 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	C17orf113	A0A1B0GUU1	675 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	KMO	O15229	486 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	PI15	O43692	258 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	COQ9	O75208	318 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	ENTPD6	O75354	484 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	POP7	O75817	140 aa	Known RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	ADA	P00813	363 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	IGFBP1	P08833	259 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	DDC	P20711	480 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	MAG	P20916	626 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	POU1F1	P28069	291 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRAMEF14	Q5SWL7	426 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRAMEF13	Q5VWM6	474 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	DESI1	Q6ICB0	168 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	C11orf96	Q7Z7L8	435 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	TAGAP	Q8N103	731 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	WDR36	Q8NI36	951 aa	Known RBP	12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	UBE2E3	Q969T4	207 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	IL4I1	Q96RQ9	567 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	NRTN	Q99748	197 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	DPEP2	Q9H4A9	486 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	HHATL	Q9HCP6	504 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	A4GALT	Q9NPC4	353 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	MKLN1	Q9UL63	735 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	CFL2	Q9Y281	166 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	LRRK1	Q38SD2	2015 aa		12.51	□□□□□ -0.41
SCAPER-215	ENST00000565507	RTCA	O00442	366 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	CTDSP2	O14595	271 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	MED26	O95402	600 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	DLGAP3	O95886	979 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	BCHE	P06276	602 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	OSM	P13725	252 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	SNRPG	P62308	76 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ILK	Q13418	452 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	CARTPT	Q16568	116 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	TIMM50	Q3ZCQ8	353 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ATAD3B	Q5T9A4	648 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	LCTL	Q6UWM7	567 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	GDPD3	Q7L5L3	318 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	CLIP4	Q8N3C7	705 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR2L2	Q8NH16	312 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	TM4SF18	Q96CE8	201 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMEM19	Q96HH6	336 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	DHRS1	Q96LJ7	313 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	TRNT1	Q96Q11	434 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	WFDC6	Q9BQY6	131 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR52A5	Q9H2C5	316 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	PLAGL1	Q9UM63	463 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	SNPH	O15079	494 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	SCG5	P05408	212 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	RB1	P06400	928 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ALOX12	P18054	663 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ELAVL4	P26378	380 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	FEN1	P39748	380 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	BCL2A1	Q16548	175 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMEM201	Q5SNT2	666 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	DEPDC1	Q5TB30	811 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ANKRD53	Q8N9V6	530 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR4D11	Q8NGI4	311 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	NUS1	Q96E22	293 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	ACAT2	Q9BWD1	397 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	UCK2	Q9BZX2	261 aa		12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507	C11orf16	Q9NQ32	467 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms