RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RNF4P78317 190 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 PLIN5Q00G26 463 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 FOLH1Q04609 750 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 ZNF750Q32MQ0 723 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 CYP20A1Q6UW02 462 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 CTAGE4Q8IX94 777 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 GPALPP1Q8IXQ4 340 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 SRRM1Q8IYB3 904 aaKnown RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 CNPPD1Q9BV87 410 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 DEPPQ9NTK1 212 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 MS4A12Q9NXJ0 267 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 ATG4BQ9Y4P1 393 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 KLF2Q9Y5W3 355 aaPredicted RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 CACNA1DQ01668 2161 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 A0A0G2JMM0 328 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 A0A1W2PPB8 328 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 A0A1W2PRS3 328 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 PINLYPA6NC86 204 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 GLOD5A6NK44 160 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 KIR3DP1A8MWS1 328 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 H0YIV9 168 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 OR10H2O60403 315 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 SMIM24O75264 130 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 CLDN9O95484 217 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 GBAP04062 536 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 RBP1P09455 135 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 PTGS2P35354 604 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 STT3AP46977 705 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 SERPINB9P50453 376 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 CCNG1P51959 295 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 CMPK2Q5EBM0 449 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 TTC19Q6DKK2 380 aaPredicted RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 XKRXQ6PP77 449 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 FGD2Q7Z6J4 655 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 CD163Q86VB7 1156 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 DOLPP1Q86YN1 238 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 CHERPQ8IWX8 916 aaKnown RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 ZCCHC7Q8N3Z6 543 aaKnown RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 ZFP62Q8NB50 900 aaPredicted RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 OR52B6Q8NGF0 335 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 OR52N2Q8NGI0 321 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 OR5L2Q8NGL0 311 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 ZNF721Q8TF20 911 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 RBM18Q96H35 190 aaKnown RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 TSPYL1Q9H0U9 437 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 DEFB127Q9H1M4 99 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 LYARQ9NX58 379 aaKnown RBP16.39■□□□□ 0.21
NME3-205ENST00000563854 PPT2Q9UMR5 302 aa16.39■□□□□ 0.21
NME3-205ENST00000563854 TRIM49D1C9J1S8 452 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 ACOT7O00154 380 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 HRKO00198 91 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 OR7A17O14581 309 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 TMPRSS11DO60235 418 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 UGDHO60701 494 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 KRT38O76015 456 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 FAM58BPP0C7Q3 252 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 NR2F6P10588 404 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 PRF1P14222 555 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 ALOX15P16050 662 aaPredicted RBP16.38■□□□□ 0.21
NME3-205ENST00000563854 PPIAP62937 165 aaKnown RBP16.38■□□□□ 0.21
NME3-205ENST00000563854 ASPHQ12797 758 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 DGAT2L6Q6ZPD8 337 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 RTL4Q6ZR62 310 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 NUDT13Q86X67 352 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 MCEMP1Q8IX19 187 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 L3MBTL4Q8NA19 623 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 OR2M7Q8NG81 312 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 TANKQ92844 425 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 SENP5Q96HI0 755 aaPredicted RBP16.38■□□□□ 0.21
NME3-205ENST00000563854 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
NME3-205ENST00000563854 GAL3ST4Q96RP7 486 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 WDR41Q9HAD4 459 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 TSC22D4Q9Y3Q8 395 aa16.38■□□□□ 0.21
NME3-205ENST00000563854 A0A087WUV0 522 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 A0A0A6YYD5 115 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 WASHC1A8K0Z3 465 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ZNF354AO60765 605 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 COX6B1P14854 86 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ECHS1P30084 290 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 BSGP35613 385 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 MAGEA12P43365 314 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 HERVK_113P63132 956 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ERVK-8P63133 956 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 IGLV3-21P80748 117 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 CUL3Q13618 768 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ZNF630Q2M218 657 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 TSNAXIP1Q2TAA8 658 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 SGO1Q5FBB7 561 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 OPN5Q6U736 354 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 FAM47EQ6ZV65 393 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 RPS27LQ71UM5 84 aaKnown RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 C9orf40Q8IXQ3 194 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 OR8K3Q8NH51 312 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 C16orf52Q8NHV5 167 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 FAM57AQ8TBR7 257 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 WDR20Q8TBZ3 569 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms