RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CUTCQ9NTM9 273 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 HCN3Q9P1Z3 774 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 EGFL7Q9UHF1 273 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 CES1P1Q9UKY3 287 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 FER1L5A0AVI2 2057 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 AGRPO00253 132 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 C8orf89P0DMQ9 161 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 PPIBP23284 216 aaKnown RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 SOX11P35716 441 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 RAB38P57729 211 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 SIM1P81133 766 aaPredicted RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 RIPK1Q13546 671 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 METTL27Q8N6F8 245 aaPredicted RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 OR2T12Q8NG77 320 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 OR5AK3PQ8NH89 298 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 ZNF501Q96CX3 271 aaPredicted RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 MMABQ96EY8 250 aaPredicted RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 CNRIP1Q96F85 164 aaPredicted RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 KAT8Q9H7Z6 458 aaKnown RBP20.71■□□□□ 0.91
LINC01960-201ENST00000563759 PRDM9Q9NQV7 894 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 CORO2BQ9UQ03 480 aa20.71■□□□□ 0.91
LINC01960-201ENST00000563759 H3BMH7 237 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 NTN3O00634 580 aaPredicted RBP20.7■□□□□ 0.9
LINC01960-201ENST00000563759 ACOT8O14734 319 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 BCAS2O75934 225 aaPredicted RBP20.7■□□□□ 0.9
LINC01960-201ENST00000563759 ATP6V1G2O95670 118 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 NTRK1P04629 796 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 CD59P13987 128 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 GPC1P35052 558 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 CHI3L1P36222 383 aaPredicted RBP20.7■□□□□ 0.9
LINC01960-201ENST00000563759 FEN1P39748 380 aaKnown RBP20.7■□□□□ 0.9
LINC01960-201ENST00000563759 ACY1Q03154 408 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 TRAP1Q12931 704 aaKnown RBP20.7■□□□□ 0.9
LINC01960-201ENST00000563759 CCNIQ14094 377 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 TLDC1Q6P9B6 456 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 TTLL10Q6ZVT0 673 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 ZFP90Q8TF47 636 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 AMDHD1Q96NU7 426 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 NDC1Q9BTX1 674 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 NDOR1Q9UHB4 597 aa20.7■□□□□ 0.9
LINC01960-201ENST00000563759 CHST10O43529 356 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 CSNK2A2P19784 350 aaPredicted RBP20.69■□□□□ 0.9
LINC01960-201ENST00000563759 MLC1Q15049 377 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 CYP51A1Q16850 503 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 DHFR2Q86XF0 187 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 ZNF583Q96ND8 569 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 GLIPR2Q9H4G4 154 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 CXorf36Q9H7Y0 433 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 ENAMQ9NRM1 1142 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 ACSL6Q9UKU0 697 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 USP22Q9UPT9 525 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 RNF103-CHMP3A0A140T963 221 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 C1QCP02747 245 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 RNH1P13489 461 aaKnown RBP20.69■□□□□ 0.9
LINC01960-201ENST00000563759 UQCRC2P22695 453 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 HTR1EP28566 365 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 OR4D2P58180 307 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 ZNF750Q32MQ0 723 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 SPDYE7PQ495Y7 208 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 CYP2R1Q6VVX0 501 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 SLITRK4Q8IW52 837 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 SAMD14Q8IZD0 417 aaPredicted RBP20.69■□□□□ 0.9
LINC01960-201ENST00000563759 OR4K14Q8NGD5 310 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 SLC26A7Q8TE54 656 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 LRGUKQ96M69 825 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 RBCK1Q9BYM8 510 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 MUC13Q9H3R2 512 aa20.69■□□□□ 0.9
LINC01960-201ENST00000563759 MUC6Q6W4X9 2439 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 MYO1GB0I1T2 1018 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 H0YIG0 161 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 CYR61O00622 381 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 ARPC2O15144 300 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 ALAS2P22557 587 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 MPIP34949 423 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 CDK9P50750 372 aaKnown RBP20.68■□□□□ 0.9
LINC01960-201ENST00000563759 MAT1AQ00266 395 aaKnown RBP20.68■□□□□ 0.9
LINC01960-201ENST00000563759 ABHD18Q0P651 414 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 CSRP2Q16527 193 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 AASDHQ4L235 1098 aaPredicted RBP20.68■□□□□ 0.9
LINC01960-201ENST00000563759 CCDC116Q8IYX3 515 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 TNIP2Q8NFZ5 429 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 ADAMTS18Q8TE60 1221 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 MVB12AQ96EY5 273 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 OR6C1Q96RD1 312 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 TRIM15Q9C019 465 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 FAM86C1Q9NVL1 165 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 MRPS33Q9Y291 106 aaKnown RBP20.68■□□□□ 0.9
LINC01960-201ENST00000563759 SNX13Q9Y5W8 968 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 NUP210LQ5VU65 1888 aa20.68■□□□□ 0.9
LINC01960-201ENST00000563759 A0A1W2PS29 197 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 FAM220BPB1ANY3 271 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 GPX2P18283 190 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SZRD1Q7Z422 152 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SPATA24Q86W54 205 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 PTRH1Q86Y79 214 aaKnown RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SHISA5Q8N114 240 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 C10orf111Q8N326 155 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 LRRC25Q8N386 305 aaPredicted RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 PEX11GQ96HA9 241 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 ACTR3BQ9P1U1 418 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms