RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LYRM4Q9HD34 91 aa14.69□□□□□ -0.06
USB1-208ENST00000563207 FARSBQ9NSD9 589 aaKnown RBP14.69□□□□□ -0.06
USB1-208ENST00000563207 TRAF6Q9Y4K3 522 aa14.69□□□□□ -0.06
USB1-208ENST00000563207 TIMM22Q9Y584 194 aa14.69□□□□□ -0.06
USB1-208ENST00000563207 CENPEQ02224 2701 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ITPR2Q14571 2701 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 C4orf51C9J302 202 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 PLPP1O14494 284 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 KLF11O14901 512 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 CHST10O43529 356 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 MAN1A2O60476 641 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 RNH1P13489 461 aaKnown RBP14.68□□□□□ -0.06
USB1-208ENST00000563207 BGNP21810 368 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 JAK1P23458 1154 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ATP5A1P25705 553 aaKnown RBP14.68□□□□□ -0.06
USB1-208ENST00000563207 DCTP40126 519 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SSR2P43308 183 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SLC1A6P48664 564 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 FOXA1P55317 472 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 KCNK10P57789 538 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ABRAXAS2Q15018 415 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 MFSD4BQ5TF39 518 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 KANK2Q63ZY3 851 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ZNF324BQ6AW86 544 aaPredicted RBP14.68□□□□□ -0.06
USB1-208ENST00000563207 METTL4Q8N3J2 472 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ZCCHC7Q8N3Z6 543 aaKnown RBP14.68□□□□□ -0.06
USB1-208ENST00000563207 RNF175Q8N4F7 328 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ARFGAP2Q8N6H7 521 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 ACOT4Q8N9L9 421 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 C7orf57Q8NEG2 295 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 TBC1D20Q96BZ9 403 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 VPS50Q96JG6 964 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 KCNA7Q96RP8 456 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SLX1AQ9BQ83 275 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 DDX31Q9H8H2 851 aaKnown RBP14.68□□□□□ -0.06
USB1-208ENST00000563207 MANSC1Q9H8J5 431 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 THAP1Q9NVV9 213 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 MS4A12Q9NXJ0 267 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SLC12A4Q9UP95 1085 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 RAP2CQ9Y3L5 183 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SPACA6W5XKT8 324 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 DOPEY1Q5JWR5 2465 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 SVILO95425 2214 aa14.68□□□□□ -0.06
USB1-208ENST00000563207 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 SYNDIG1LA6NDD5 238 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 A8MUI8 341 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 NPIPB8E9PQR5 432 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 PSMD12O00232 456 aaPredicted RBP14.67□□□□□ -0.06
USB1-208ENST00000563207 SLC28A1O00337 649 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 CDC123O75794 336 aaPredicted RBP14.67□□□□□ -0.06
USB1-208ENST00000563207 ETHE1O95571 254 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 C8orf89P0DMQ9 161 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 MST1P26927 711 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 XCR1P46094 333 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 OLR1P78380 273 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 PMP22Q01453 160 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 BST1Q10588 318 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 MINDY4Q4G0A6 757 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 SPIN4Q56A73 249 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 TCHHL1Q5QJ38 904 aaPredicted RBP14.67□□□□□ -0.06
USB1-208ENST00000563207 SH2D4BQ5SQS7 431 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 FAM180AQ6UWF9 173 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 NUDT13Q86X67 352 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 CA13Q8N1Q1 262 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 NPAS2Q99743 824 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 SHCBP1LQ9BZQ2 653 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 TNFRSF12AQ9NP84 129 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 INTS9Q9NV88 658 aaKnown RBP14.67□□□□□ -0.06
USB1-208ENST00000563207 RIC8BQ9NVN3 520 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 PHF11Q9UIL8 331 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 DAPP1Q9UN19 280 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 MRPS33Q9Y291 106 aaKnown RBP14.67□□□□□ -0.06
USB1-208ENST00000563207 DNAJC15Q9Y5T4 150 aa14.67□□□□□ -0.06
USB1-208ENST00000563207 A0A0G2JN53 185 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 DYTNA2CJ06 578 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 SAP18O00422 153 aaKnown RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 RGS14O43566 566 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ITM2AO43736 263 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 SNNO75324 88 aaPredicted RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 SH3BGRLO75368 114 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 FHP07954 510 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 EDN3P14138 238 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CHN1P15882 459 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 PRPH2P23942 346 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ARRB2P32121 409 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 BSGP35613 385 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 RPL14P50914 215 aaKnown RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 TDGF1P3P51864 188 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 LIM2P55344 173 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 RAB38P57729 211 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 IMPG1Q17R60 797 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 UGT3A2Q3SY77 523 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 C1QL3Q5VWW1 255 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CLEC6AQ6EIG7 209 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CYP20A1Q6UW02 462 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 ZNF793Q6ZN11 406 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CPEB2Q7Z5Q1 589 aaKnown RBP14.66□□□□□ -0.06
USB1-208ENST00000563207 ANKRD37Q7Z713 158 aa14.66□□□□□ -0.06
USB1-208ENST00000563207 CHTF18Q8WVB6 975 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms