RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 MORN4Q8NDC4 146 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 OR2L5Q8NG80 312 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 OR14A16Q8NHC5 309 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 NUDT8Q8WV74 236 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 MAIP1Q8WWC4 291 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 DAZLQ92904 295 aaKnown RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 RNASE6Q93091 150 aaKnown RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 UCN3Q969E3 161 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ANKRD9Q96BM1 317 aaPredicted RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 CERS2Q96G23 380 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 WDR83Q9BRX9 315 aaKnown RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 TMEM79Q9BSE2 394 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 CAB39LQ9H9S4 337 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF490Q9ULM2 529 aaPredicted RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 DAPP1Q9UN19 280 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 MRPS33Q9Y291 106 aaKnown RBP10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 VWA7Q9Y334 891 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 DSCAMO60469 2012 aa10.74□□□□□ -0.69
NSMCE1-202ENST00000561960 CSPG4Q6UVK1 2322 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 A0A1W2PS29 197 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 CLCA1A8K7I4 914 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 H7C1Q1 480 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 DVL2O14641 736 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 TAPBPO15533 448 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 CTNSO60931 367 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 H2AFYO75367 372 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 PCNAP12004 261 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF37AP17032 561 aaPredicted RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 TCEA1P23193 301 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 SOX18P35713 384 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 MSH2P43246 934 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 HSPA7P48741 367 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 MTTPP55157 894 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 DCAF7P61962 342 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 NKX6-1P78426 367 aaPredicted RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 FOXF2Q12947 444 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF791Q3KP31 576 aaPredicted RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 EIPR1Q53HC9 387 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 PIGGQ5H8A4 983 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 RNASEH2BQ5TBB1 312 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC22A10Q63ZE4 541 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 DESI1Q6ICB0 168 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 OPN5Q6U736 354 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 LYPD8Q6UX82 237 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 LMNTD2Q8IXW0 634 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 PPIL6Q8IXY8 311 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 GOLM1Q8NBJ4 401 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 NEIL3Q8TAT5 605 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 SERINC2Q96SA4 455 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 PLEKHF2Q9H8W4 249 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 PRDM7Q9NQW5 492 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 COPS7AQ9UBW8 275 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 VTI1BQ9UEU0 232 aa10.73□□□□□ -0.69
NSMCE1-202ENST00000561960 MXRA5Q9NR99 2828 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM95CA0A1B0GW59 222 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 TRIM64A6NGJ6 449 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 TRIM64BA6NI03 449 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 HSPB2A8KAH6 182 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 CDK2AP1O14519 115 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 HCN1O60741 890 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 TGFB1P01137 390 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ENO2P09104 434 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 GNAZP19086 355 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 CD53P19397 219 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 CPN2P22792 545 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 HOXC12P31275 282 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ELK3P41970 407 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 FBXW4P57775 412 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 HERVK_113P63132 956 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ERVK-8P63133 956 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 DDX39BQ13838 428 aaKnown RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 DOC2AQ14183 400 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 PPP1R7Q15435 360 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 HSPB2Q16082 182 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 SPANXN3Q5MJ09 141 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 Q5PR19 223 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 C18orf63Q68DL7 685 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM45BPQ6NSW5 357 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 C9orf106Q8NAJ2 232 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 FAM45AQ8TCE6 357 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 RHBDF1Q96CC6 855 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 SPACA9Q96E40 222 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ARSGQ96EG1 525 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 SENP5Q96HI0 755 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 GNRHR2Q96P88 292 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 DGAT2Q96PD7 388 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 DOHHQ9BU89 302 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 NPLQ9BXD5 320 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ERVK-6Q9BXR3 956 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ZFP64Q9NPA5 681 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 WWOXQ9NZC7 414 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 CTNNAL1Q9UBT7 734 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 B4GALT7Q9UBV7 327 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms