RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CRYGNQ8WXF5 182 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 DNASE2BQ8WZ79 361 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ZNF707Q96C28 371 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 GIMAP5Q96F15 307 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ZNF577Q9BSK1 485 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 FUT8Q9BYC5 575 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 NFKBIZQ9BYH8 718 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 LSG1Q9H089 658 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 LMAN1LQ9HAT1 526 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 AGPAT5Q9NUQ2 364 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 DNAJC17Q9NVM6 304 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 BARHL2Q9NY43 387 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 OR6C2Q9NZP2 312 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SEPT10Q9P0V9 454 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 ZNF624Q9P2J8 865 aaPredicted RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 MTRRQ9UBK8 725 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SLC12A6Q9UHW9 1150 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 FBXL5Q9UKA1 691 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 RUVBL2Q9Y230 463 aaKnown RBP3.35□□□□□ -1.87
HERC1-215ENST00000561436 GINS2Q9Y248 185 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 R4GN57 208 aa3.35□□□□□ -1.87
HERC1-215ENST00000561436 SCN5AQ14524 2016 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 IGLV3-22A0A075B6J6 115 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 LRRD1A4D1F6 860 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 SMCO2A6NFE2 343 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 SDR42E2A6NKP2 422 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 E7EWF7 191 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 F8VVB4 439 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 F8VWA3 439 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 BLOC1S5-TXNDC5H3BN57 136 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 TEX28O15482 410 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 TRAPPC3O43617 180 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 N4BP1O75113 896 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 FGF19O95750 216 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 CLPTM1O96005 669 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 PLGP00747 810 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 VTNP04004 478 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 DCNP07585 359 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 ATP6V1B1P15313 513 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ITIH1P19827 911 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 NR1D1P20393 614 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 LHCGRP22888 699 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ALDH4A1P30038 563 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 TIA1P31483 386 aaKnown RBP eCLIP3.34□□□□□ -1.87
HERC1-215ENST00000561436 CA8P35219 290 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 RDXP35241 583 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 CLDN15P56746 228 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 PTENP60484 403 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 PSMC5P62195 406 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 SGCGQ13326 291 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 HNRNPDQ14103 355 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 TFDP1Q14186 410 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 RCN2Q14257 317 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 NFE2L1Q14494 772 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 OPCMLQ14982 345 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 CCDC6Q16204 474 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ZNF674Q2M3X9 581 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 GTDC1Q4AE62 458 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ZNF789Q5FWF6 425 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 FGD3Q5JSP0 725 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 GLRA4Q5JXX5 417 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 LIN9Q5TKA1 542 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 GALNT17Q6IS24 598 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 TTC27Q6P3X3 843 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 IYDQ6PHW0 289 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 GBP6Q6ZN66 633 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ZNF771Q7L3S4 317 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 OTUD6AQ7L8S5 288 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 SNX32Q86XE0 403 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 CCDC60Q8IWA6 550 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 FBXL16Q8N461 479 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 MAPKAPK5-AS1Q8N8E1 139 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 FIBINQ8TAL6 211 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 ELSPBP1Q96BH3 223 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 HNRNPABQ99729 332 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 DESI2Q9BSY9 194 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 OR2B2Q9GZK3 357 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 C8orf33Q9H7E9 229 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 C6orf50Q9HD87 102 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 INTS10Q9NVR2 710 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 MDFICQ9P1T7 246 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 KCNJ14Q9UNX9 436 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 PIN4Q9Y237 131 aaKnown RBP3.34□□□□□ -1.87
HERC1-215ENST00000561436 C2CD2Q9Y426 696 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 CHD9Q3L8U1 2897 aa3.34□□□□□ -1.87
HERC1-215ENST00000561436 SF3B1O75533 1304 aaKnown RBP eCLIP3.34□□□□□ -1.872e-7■■■■■ 41.4
HERC1-215ENST00000561436 ATRXP46100 2492 aa3.34□□□□□ -1.88
HERC1-215ENST00000561436 SCN10AQ9Y5Y9 1956 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 C13orf42A0A1B0GVH6 325 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ILVBLA1L0T0 632 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 A4D1N5 150 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 EXTL3O43909 919 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 SELENOFO60613 162 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GLRA3O75311 464 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CDK2AP2O75956 126 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms