RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FPGTO14772 594 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ARPC1BO15143 372 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 ADAM12O43184 909 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF264O43296 627 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 HSPA12AO43301 675 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 OR1F1O43749 312 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC28A2O43868 658 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TIMM8AO60220 97 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 RNASEH1O60930 286 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 GLRA3O75311 464 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF254O75437 659 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SORBS2O94875 1100 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 H6PDO95479 791 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GNA14O95837 355 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TGM6O95932 706 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PGK1P00558 417 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TRBC1P01850 177 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 KRT6AP02538 564 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CYP1A2P05177 515 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 F7P08709 466 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM191BP0C7N4 346 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC35G4P0C7Q5 338 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 HKR1P10072 659 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 HOXB8P17481 243 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 SPINK2P20155 84 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TPSB2P20231 275 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ITPKBP27987 946 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GTF2E2P29084 291 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 ALDH1B1P30837 517 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SRD5A2P31213 254 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 RRM2P31350 389 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PTGS2P35354 604 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TRIM23P36406 574 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GYG1P46976 350 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 NPY2RP49146 381 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC11A1P49279 550 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CRYBB1P53674 252 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 SEC61GP60059 68 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SEC61BP60468 96 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 PPIAP62937 165 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 MRPS15P82914 257 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 MAT1AQ00266 395 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 INSM1Q01101 510 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 IL9RQ01113 521 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GHRHRQ02643 423 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TROAPQ12815 778 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LAMB3Q13751 1172 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CEACAM7Q14002 265 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GPR176Q14439 515 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 EXOSC7Q15024 291 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 TPSAB1Q15661 275 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CLPPQ16740 277 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 PCK2Q16822 640 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MTHFSDQ2M296 383 aaKnown RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 SGSM1Q2NKQ1 1148 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 VMACQ2NL98 169 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZNF829Q3KNS6 432 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 ITPRIPL2Q3MIP1 535 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 UGT3A2Q3SY77 523 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PTPN20Q4JDL3 420 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 NKAIN1Q4KMZ8 207 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 HIKESHIQ53FT3 197 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LY6G5CQ5SRR4 150 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 FNBP1LQ5T0N5 605 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LGSNQ5TDP6 509 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 C1orf189Q5VU69 101 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 OTUD1Q5VV17 481 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 LIPJQ5W064 366 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 RHBDD2Q6NTF9 364 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM53Q6P2H8 277 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 VITQ6UXI7 678 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PACS1Q6VY07 963 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CCNI2Q6ZMN8 369 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 C17orf107Q6ZR85 190 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TTLL10Q6ZVT0 673 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 Q7L0L9 218 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LHFPL4Q7Z7J7 247 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SERINC5Q86VE9 423 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM17Q86X19 198 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ZDHHC17Q8IUH5 632 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 WDR49Q8IV35 697 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 GPALPP1Q8IXQ4 340 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CCDC65Q8IXS2 484 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM123Q8N131 208 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 KRT222Q8N1A0 295 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 FAM58AQ8N1B3 248 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PYROXD2Q8N2H3 581 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ARHGAP18Q8N392 663 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 DNAJC22Q8N4W6 341 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 AADATQ8N5Z0 425 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CSGALNACT2Q8N6G5 542 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LINC01356Q8N9X3 169 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TEX45Q8NA69 505 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 SLC44A5Q8NCS7 719 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ICA1LQ8NDH6 482 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 FAM83FQ8NEG4 500 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 BHLHE22Q8NFJ8 381 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 OR13C3Q8NGS6 347 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 OR4L1Q8NH43 312 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 OR52I2Q8NH67 350 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms