RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NFKBIDQ8NI38 313 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 TFAP2CQ92754 450 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 MOAP1Q96BY2 351 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 HSH2DQ96JZ2 352 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SLC38A3Q99624 504 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 RAB33BQ9H082 229 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 PRMT8Q9NR22 394 aaPredicted RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 SEMA3GQ9NS98 782 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 GIMAP4Q9NUV9 329 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 PADI4Q9UM07 663 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CSNK1G3Q9Y6M4 447 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SUV39H1O43463 412 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ERAL1O75616 437 aaKnown RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 HPRP00739 348 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 FABP3P05413 133 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CDH3P22223 829 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 MPIP34949 423 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ALDH3A2P51648 485 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CASP9P55211 416 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 LIM2P55344 173 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SELENOWP63302 87 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 DEFB133Q30KQ1 61 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 IQCCQ4KMZ1 466 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ZC3H12BQ5HYM0 836 aaKnown RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 CEACAM20Q6UY09 585 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 VTCN1Q7Z7D3 282 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 GALNT10Q86SR1 603 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CARM1Q86X55 608 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ARHGEF39Q8N4T4 335 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 METTL25Q8N6Q8 603 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 HORMAD2Q8N7B1 307 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 C7orf34Q96L11 122 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 DOHHQ9BU89 302 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ANKRD60Q9BZ19 345 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 FAM60AQ9NP50 221 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CD320Q9NPF0 282 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 UCKL1Q9NWZ5 548 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 EPHA6Q9UF33 1036 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 ANGPT4Q9Y264 503 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 MRPS2Q9Y399 296 aaKnown RBP12.19□□□□□ -0.46
SNX1-211ENST00000560829 ZNF451Q9Y4E5 1061 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CROCCQ5TZA2 2017 aa12.19□□□□□ -0.46
SNX1-211ENST00000560829 CPN2P22792 545 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 GPC1P35052 558 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 CTSKP43235 329 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 CHN2P52757 468 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 ARSFP54793 590 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 KCNJ10P78508 379 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 DUSP2Q05923 314 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 DAG1Q14118 895 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 SPIDRQ14159 915 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 BHLHB9Q6PI77 547 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 TBPL2Q6SJ96 375 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 PATL1Q86TB9 770 aaKnown RBP12.18□□□□□ -0.46
SNX1-211ENST00000560829 DNAJC22Q8N4W6 341 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 OR10Q1Q8NGQ4 319 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 MIPOL1Q8TD10 442 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 N4BP2L2Q92802 583 aaPredicted RBP12.18□□□□□ -0.46
SNX1-211ENST00000560829 TCTN2Q96GX1 697 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 RDH12Q96NR8 316 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 NPLQ9BXD5 320 aaPredicted RBP12.18□□□□□ -0.46
SNX1-211ENST00000560829 SMPD3Q9NY59 655 aaPredicted RBP12.18□□□□□ -0.46
SNX1-211ENST00000560829 USE1Q9NZ43 259 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 PADI2Q9Y2J8 665 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 ZNF780BQ9Y6R6 833 aa12.18□□□□□ -0.46
SNX1-211ENST00000560829 A0A1B0GVT2 93 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 G3V2T6 193 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 HMGN4O00479 90 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 GNGT2O14610 69 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 HCRTR1O43613 425 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SRPX2O60687 465 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 GALR3O60755 368 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 SDC3O75056 442 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 IFNA14P01570 189 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ALPLP05186 524 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 EIF2S1P05198 315 aaKnown RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 TFPTP0C1Z6 253 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 UBTFL6P0CB48 400 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 AQP1P29972 269 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 TLX1P31314 330 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 DCTP40126 519 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 FNTBP49356 437 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 VSX2P58304 361 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 VLDLRP98155 873 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SIGLEC14Q08ET2 396 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 MERTKQ12866 999 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 PRTGQ2VWP7 1150 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 REEP3Q6NUK4 255 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 TSSK4Q6SA08 328 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 CCDC116Q8IYX3 515 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms