RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 INAQ16352 499 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 WDR93Q6P2C0 686 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZYG11AQ6WRX3 759 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 HSDL2Q6YN16 418 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM178AQ8NBL3 297 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 MORN4Q8NDC4 146 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 PTPMT1Q8WUK0 201 aaPredicted RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 L3HYPDHQ96EM0 354 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZNF382Q96SR6 550 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZNF717Q9BY31 904 aaPredicted RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 HES7Q9BYE0 225 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 LIN28AQ9H9Z2 209 aaKnown RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 BRF2Q9HAW0 419 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 MID1IP1Q9NPA3 183 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 VPS29Q9UBQ0 182 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 EMCNQ9ULC0 261 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 PPT2Q9UMR5 302 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ASB4Q9Y574 426 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 A0A1W2PR48 441 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 G3V2L1 256 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 MANBAO00462 879 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 PLIN3O60664 434 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC25A12O75746 678 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 CBX6O95503 412 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 AIFM1O95831 613 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 NUDT17P0C025 328 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 ALOX15P16050 662 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 PIK3R1P27986 724 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 CRHR1P34998 444 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 STT3AP46977 705 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 SSR4P51571 173 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 NAGLUP54802 743 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 PKNOX1P55347 436 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 PMP22Q01453 160 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 SRSF11Q05519 484 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 BIKQ13323 160 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 TCHHL1Q5QJ38 904 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 FAM219BQ5XKK7 198 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 COMMD6Q7Z4G1 85 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 SRRM1Q8IYB3 904 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 METTL4Q8N3J2 472 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 RIBC1Q8N443 379 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 MDS2Q8NDY4 140 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 RDH11Q8TC12 318 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC2A12Q8TD20 617 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 DOK4Q8TEW6 326 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 TAAR6Q96RI8 345 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 MID2Q9UJV3 735 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF225Q9UK10 706 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF223Q9UK11 482 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 ERVK-11Q9UQG0 969 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 TIMM22Q9Y584 194 aa12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
CTDSPL2-209ENST00000560620 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 WASHC1A8K0Z3 465 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 WWP2O00308 870 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 OR2J2O76002 312 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ESRRBO95718 433 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 GPR75O95800 540 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 SP1P08047 785 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 EDN3P14138 238 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ALDH9A1P49189 494 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 HLCSP50747 726 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 CSTF3Q12996 717 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 IMPG1Q17R60 797 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 NDUFAF5Q5TEU4 345 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 C6orf163Q5TEZ5 329 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF468Q5VIY5 522 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 MRM1Q6IN84 353 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 SLC25A25Q6KCM7 469 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 SCIMPQ6UWF3 145 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 C16orf47Q6ZP98 133 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 SH2D5Q6ZV89 423 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 GALNTL5Q7Z4T8 443 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ST13P4Q8IZP2 240 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 CYP4Z2PQ8N1L4 340 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 C1orf52Q8N6N3 182 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ZNF321PQ8N8H1 164 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ST6GALNAC3Q8NDV1 305 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ASB15Q8WXK1 588 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 NR4A3Q92570 626 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 CAVIN3Q969G5 261 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 ART5Q96L15 291 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 PELOQ9BRX2 385 aaKnown RBP12.07□□□□□ -0.48
CTDSPL2-209ENST00000560620 SHCBP1LQ9BZQ2 653 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms