RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CYR61O00622 381 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 DSCR3O14972 297 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CHST10O43529 356 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FOXS1O43638 330 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CBFA2T3O75081 653 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 RDH16O75452 317 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ERAL1O75616 437 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 BCAS2O75934 225 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 PDE5AO76074 875 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SLITRK5O94991 958 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 BMP10O95393 424 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 KRT75O95678 551 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 C6orf47O95873 294 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 GSNP06396 782 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CTSBP07858 339 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ABCB1P08183 1280 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 HBQ1P09105 142 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 IFI6P09912 130 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CDK4P11802 303 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FOLR1P15328 257 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 IL10P22301 178 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CSTF2P33240 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 MAGEA8P43361 318 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 GSK3BP49841 420 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 MTPNP58546 118 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 LIPEQ05469 1076 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ZFP36L1Q07352 338 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FADDQ13158 208 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 MAP7Q14244 749 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FLOT2Q14254 428 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 IL11RAQ14626 422 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FXNQ16595 210 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 PRSS53Q2L4Q9 553 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 RABL3Q5HYI8 236 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 TMEM64Q6YI46 380 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 TTLL10Q6ZVT0 673 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SERPINA11Q86U17 422 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF595Q8IYB9 648 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 RNF148Q8N7C7 305 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SFXN5Q8TD22 340 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ZFP90Q8TF47 636 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 POP5Q969H6 163 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FAM120BQ96EK7 910 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 MMABQ96EY8 250 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CNRIP1Q96F85 164 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF583Q96ND8 569 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 AMDHD1Q96NU7 426 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 KCTD14Q9BQ13 255 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 CPPED1Q9BRF8 314 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 DENND2DQ9H6A0 471 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 KAT8Q9H7Z6 458 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 TPT1P8Q9HAU6 139 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SEMA3GQ9NS98 782 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 ACTR3BQ9P1U1 418 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 NEUROG3Q9Y4Z2 214 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SDK2Q58EX2 2172 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 RIF1Q5UIP0 2472 aaKnown RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 FAM186AA6NE01 2351 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 A0A1B0GX78 115 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 ELOVL7A1L3X0 281 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 SYNDIG1LA6NDD5 238 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF860A6NHJ4 632 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 GLOD5A6NK44 160 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 C4orf47A7E2U8 309 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 FAM220BPB1ANY3 271 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 CLDN4O14493 209 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 ACOT8O14734 319 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF749O43361 778 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 FKBP6O75344 327 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 GMNNO75496 209 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 GPR75O95800 540 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 FGF5P12034 268 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 CCKBRP32239 447 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 GPC1P35052 558 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 XKP51811 444 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 NCBP2P52298 156 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 HSD17B7P56937 341 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 SNRPNP63162 240 aaKnown RBP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 TXNL4AP83876 142 aaKnown RBP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 SELPLGQ14242 412 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 KPNB1Q14974 876 aaKnown RBP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 PHF19Q5T6S3 580 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 RHBDD2Q6NTF9 364 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 ERICH5Q6P6B1 374 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 BHLHB9Q6PI77 547 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 DNAJC14Q6Y2X3 702 aaPredicted RBP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 RBM44Q6ZP01 1051 aaKnown RBP8.11□□□□□ -1.11
TRAF3-209ENST00000560463 GPR155Q7Z3F1 870 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 DHFR2Q86XF0 187 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 PPP1R3BQ86XI6 285 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 CALHM3Q86XJ0 350 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 MMP21Q8N119 569 aa8.11□□□□□ -1.11
TRAF3-209ENST00000560463 LRRC25Q8N386 305 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms