RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 OR10H2O60403 315 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 CLDN14O95500 239 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 P04436 131 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 NR2F6P10588 404 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 MTHFD2P13995 350 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 CCNG1P51959 295 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 RNF4P78317 190 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 IFT88Q13099 833 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 SP5Q6BEB4 398 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 TTC19Q6DKK2 380 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 SLC29A4Q7RTT9 530 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 GDF7Q7Z4P5 450 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 ST13P4Q8IZP2 240 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 L3MBTL4Q8NA19 623 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 FAM57AQ8TBR7 257 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 TRIM44Q96DX7 344 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 FBXL20Q96IG2 436 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 SCYL1Q96KG9 808 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 RASL10BQ96S79 203 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 MTERF1Q99551 399 aaKnown RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 FAM173AQ9BQD7 235 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 TP63Q9H3D4 680 aaPredicted RBP13.08□□□□□ -0.32
TPM1-223ENST00000560445 CLDN16Q9Y5I7 305 aa13.08□□□□□ -0.32
TPM1-223ENST00000560445 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 OR14I1A6ND48 311 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 CAPN14A8MX76 684 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 LDB3O75112 727 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ACSL3O95573 720 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 ALOX15P16050 662 aaPredicted RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 GALNSP34059 522 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 HK2P52789 917 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 IRF9Q00978 393 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
TPM1-223ENST00000560445 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 IL20RBQ6UXL0 311 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 GOLGA7Q7Z5G4 137 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 PTGR2Q8N8N7 351 aaPredicted RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 AGAP11Q8TF27 550 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ASB5Q8WWX0 329 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ISL2Q96A47 359 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 PAFAH2Q99487 392 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 MRPL57Q9BQC6 102 aaKnown RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 OR51B5Q9H339 312 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 CDC42EP4Q9H3Q1 356 aaKnown RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 SACM1LQ9NTJ5 587 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ZNF223Q9UK11 482 aaPredicted RBP13.07□□□□□ -0.32
TPM1-223ENST00000560445 STK38LQ9Y2H1 464 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 ASB1Q9Y576 335 aa13.07□□□□□ -0.32
TPM1-223ENST00000560445 GTF3C1Q12789 2109 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 FAM47E-STBD1D6RA91 191 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 TGFBR3LH3BV60 316 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 WWP2O00308 870 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 SAP18O00422 153 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 RTCAO00442 366 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 PLPP1O14494 284 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 BCKDKO14874 412 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
TPM1-223ENST00000560445 GPR75O95800 540 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 OTCP00480 354 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 TPOP07202 933 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 SOX3P41225 446 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 RPS13P62277 151 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 PPIAP62937 165 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 FOLH1Q04609 750 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 SPRED3Q2MJR0 410 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 RNF111Q6ZNA4 994 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 FAM47EQ6ZV65 393 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 ACAD11Q709F0 780 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 TAGAPQ8N103 731 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 CEP112Q8N8E3 955 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 OR2M7Q8NG81 312 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 CA5BP1Q8WTZ4 195 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 MRPL46Q9H2W6 279 aaKnown RBP13.06□□□□□ -0.32
TPM1-223ENST00000560445 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 IL1RL2Q9HB29 575 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 CNIH4Q9P003 139 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 B4GALT7Q9UBV7 327 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
TPM1-223ENST00000560445 BOKQ9UMX3 212 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms