RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZCCHC23Q6ZST2 131 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ADAMTSL2Q86TH1 951 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 THOC6Q86W42 341 aaKnown RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CEP97Q8IW35 865 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CENPLQ8N0S6 344 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 ANKRD53Q8N9V6 530 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 RFWD2Q8NHY2 731 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 NXNL1Q96CM4 212 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 FAR2Q96K12 515 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 RAB3IPQ96QF0 476 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 MRGBPQ9NV56 204 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 HEY2Q9UBP5 337 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 VTI1BQ9UEU0 232 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 NPIPA1Q9UND3 350 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 KLF13Q9Y2Y9 288 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-214ENST00000560402 MEMO1Q9Y316 297 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 OARD1Q9Y530 152 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 CAPN7Q9Y6W3 813 aa12.68□□□□□ -0.38
SMAD3-214ENST00000560402 SYCE1LA8MT33 242 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 PRRG2O14669 202 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 B4GALT2O60909 372 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 SMIM10L1P0DMW3 83 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 HLCSP50747 726 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 CLCN2P51788 898 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 AQP5P55064 265 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 RAB8AP61006 207 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 BNIP1Q12981 228 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 MAPKAPK3Q16644 382 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 GALNTL6Q49A17 601 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 TECRLQ5HYJ1 363 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-214ENST00000560402 KLHDC8AQ8IYD2 350 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 KIF2BQ8N4N8 673 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 FITM2Q8N6M3 262 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
SMAD3-214ENST00000560402 SMIM10Q96HG1 83 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 EGFL8Q99944 293 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 TRMOQ9BU70 441 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 NPLQ9BXD5 320 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-214ENST00000560402 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 TRIM8Q9BZR9 551 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 PITHD1Q9GZP4 211 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-214ENST00000560402 MYLK2Q9H1R3 596 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 TSPAN10Q9H1Z9 355 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 RAP2CQ9Y3L5 183 aa12.67□□□□□ -0.38
SMAD3-214ENST00000560402 AKAP9Q99996 3911 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 NPEPPSL1A6NEC2 478 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 E9PLN8 166 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 KITP10721 976 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 GNAZP19086 355 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 TFEBP19484 476 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 MAOAP21397 527 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 SSTR2P30874 369 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 HYAL2Q12891 473 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF460Q14592 562 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 RBBP5Q15291 538 aaKnown RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 TOR1AIP1Q5JTV8 583 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 FAM91A1Q658Y4 838 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 CA13Q8N1Q1 262 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 CPSF7Q8N684 471 aaKnown RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 NFAM1Q8NET5 270 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 B3GNT7Q8NFL0 401 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 RHEBL1Q8TAI7 183 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 CREB3L4Q8TEY5 395 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 STON2Q8WXE9 905 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 KLHL29Q96CT2 875 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 VMP1Q96GC9 406 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 UBXN10Q96LJ8 280 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 VKORC1Q9BQB6 163 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 NECTIN3Q9NQS3 549 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 MARCOQ9UEW3 520 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 PPIEQ9UNP9 301 aaKnown RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 TRIM33Q9UPN9 1127 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 SLC22A14Q9Y267 594 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 MRPS33Q9Y291 106 aaKnown RBP12.66□□□□□ -0.38
SMAD3-214ENST00000560402 PDZD2O15018 2839 aa12.66□□□□□ -0.38
SMAD3-214ENST00000560402 DCHS2Q6V1P9 2916 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 C4orf51C9J302 202 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 KLRC4-KLRK1H3BQV0 150 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-214ENST00000560402 B3GALT4O96024 378 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 ALOX15P16050 662 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-214ENST00000560402 HSD17B7P56937 341 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 RAB38P57729 211 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 BTG2P78543 158 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 KRT72Q14CN4 511 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 ZNF468Q5VIY5 522 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms