RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SCN2AQ99250 2005 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 IGHV3-20A0A0C4DH32 117 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 WASHC1A8K0Z3 465 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 EPHA3P29320 983 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 ALDH9A1P49189 494 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 EMX2Q04743 252 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 STX4Q12846 297 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 DCAF10Q5QP82 559 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 CPZQ66K79 652 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 OGFOD2Q6N063 350 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 GPR155Q7Z3F1 870 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 OR4N5Q8IXE1 308 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 TMEM132CQ8N3T6 1108 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 TMEM102Q8N9M5 508 aaPredicted RBP20.31■□□□□ 0.84
SNX1-206ENST00000559389 EGLN2Q96KS0 407 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 FER1L6-AS2Q96M78 137 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 TSSK3Q96PN8 268 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 WDR55Q9H6Y2 383 aaPredicted RBP20.31■□□□□ 0.84
SNX1-206ENST00000559389 ADAP2Q9NPF8 381 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 NOP53Q9NZM5 478 aaKnown RBP20.31■□□□□ 0.84
SNX1-206ENST00000559389 EHD3Q9NZN3 535 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 C5AR2Q9P296 337 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 EXO1Q9UQ84 846 aaKnown RBP20.31■□□□□ 0.84
SNX1-206ENST00000559389 KCNMB2Q9Y691 235 aa20.31■□□□□ 0.84
SNX1-206ENST00000559389 NSG1A0A0A6YYJ2 146 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 GOLGA8QA0A0J9YX86 632 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 GOLGA8OA6NCC3 632 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 ARGFXA6NJG6 315 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 GOLGA8NF8WBI6 632 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 SEC24DO94855 1032 aaPredicted RBP20.3■□□□□ 0.84
SNX1-206ENST00000559389 GPR75O95800 540 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 PRPS2P11908 318 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 LBPP18428 481 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 DDCP20711 480 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 RRADP55042 308 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 SLC9B1Q4ZJI4 515 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 IL23RQ5VWK5 629 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 PAPD4Q6PIY7 484 aaKnown RBP20.3■□□□□ 0.84
SNX1-206ENST00000559389 NDUFAF7Q7L592 441 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 APLFQ8IW19 511 aaPredicted RBP20.3■□□□□ 0.84
SNX1-206ENST00000559389 LIX1Q8N485 282 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 C7orf57Q8NEG2 295 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 IMMP1LQ96LU5 166 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 LPAR4Q99677 370 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 ALOXE3Q9BYJ1 711 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 ZNF160Q9HCG1 818 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 DMXL2Q8TDJ6 3036 aa20.3■□□□□ 0.84
SNX1-206ENST00000559389 ITGB2P05107 769 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 ASMTP46597 345 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 PLIN5Q00G26 463 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 C2orf80Q0P641 193 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 TERF2Q15554 542 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 ELAVL1Q15717 326 aaKnown RBP20.29■□□□□ 0.84
SNX1-206ENST00000559389 EPGNQ6UW88 154 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 PARP9Q8IXQ6 854 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 OR4K14Q8NGD5 310 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 CLHC1Q8NHS4 586 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 ACTRT2Q8TDY3 377 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 ZNF764Q96H86 408 aaPredicted RBP20.29■□□□□ 0.84
SNX1-206ENST00000559389 PELOQ9BRX2 385 aaKnown RBP20.29■□□□□ 0.84
SNX1-206ENST00000559389 TUBB6Q9BUF5 446 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 MIEF1Q9NQG6 463 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 EIF3LQ9Y262 564 aaKnown RBP20.29■□□□□ 0.84
SNX1-206ENST00000559389 ANKRD11Q6UB99 2663 aaPredicted RBP20.29■□□□□ 0.84
SNX1-206ENST00000559389 CELSR3Q9NYQ7 3312 aa20.29■□□□□ 0.84
SNX1-206ENST00000559389 MYOCOSA0A1B0GUC4 107 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 A0A1W2PS29 197 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 SAGE2PA6NJ88 616 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 MASP2O00187 686 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 DIAPH2O60879 1101 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 TGDSO95455 350 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 PIK3R1P27986 724 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 STT3AP46977 705 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 CHAF1BQ13112 559 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 PTGR1Q14914 329 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 BORAQ6PGQ7 559 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 APOBEC4Q8WW27 367 aaKnown RBP20.28■□□□□ 0.84
SNX1-206ENST00000559389 KLHL29Q96CT2 875 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 DGAT2Q96PD7 388 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 ING2Q9H160 280 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 PNO1Q9NRX1 252 aaKnown RBP20.28■□□□□ 0.84
SNX1-206ENST00000559389 FGFR1OP2Q9NVK5 253 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 BAIAP2L1Q9UHR4 511 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 UTS2RQ9UKP6 389 aa20.28■□□□□ 0.84
SNX1-206ENST00000559389 USP24Q9UPU5 2620 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 IFNA16P05015 189 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 ALDOCP09972 364 aaKnown RBP20.27■□□□□ 0.84
SNX1-206ENST00000559389 G6PDP11413 515 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 AQP5P55064 265 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 DIO3P55073 304 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 SLC26A5P58743 744 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 ACTN3Q08043 901 aaPredicted RBP20.27■□□□□ 0.84
SNX1-206ENST00000559389 Q0VFX4 171 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 AIMP2Q13155 320 aaKnown RBP20.27■□□□□ 0.84
SNX1-206ENST00000559389 BIKQ13323 160 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 PDE7AQ13946 482 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 TBR1Q16650 682 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 TICAM1Q8IUC6 712 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 ST13P4Q8IZP2 240 aaPredicted RBP20.27■□□□□ 0.84
SNX1-206ENST00000559389 CLEC1AQ8NC01 280 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms