RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TCHHL1Q5QJ38 904 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 CYP20A1Q6UW02 462 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 TRMT10CQ7L0Y3 403 aaKnown RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 LGI4Q8N135 537 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM151AQ8N4L1 468 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 FAM98AQ8NCA5 519 aaKnown RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ASB15Q8WXK1 588 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 DAZLQ92904 295 aaKnown RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 REPS1Q96D71 796 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 DGAT2Q96PD7 388 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 CNPPD1Q9BV87 410 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF717Q9BY31 904 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 MRPL1Q9BYD6 325 aaKnown RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 MRPL46Q9H2W6 279 aaKnown RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ADGRE2Q9UHX3 823 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ASB4Q9Y574 426 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 UNC79Q9P2D8 2635 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF407Q9C0G0 2248 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1W2PPM1 405 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 A8MVJ9 347 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 STX16-NPEPL1H3BU86 382 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 STX16O14662 325 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 PROM1O43490 865 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ASNA1O43681 348 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 CDC40O60508 579 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 OR4F21O95013 312 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 SCELO95171 688 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 AIFM1O95831 613 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 PYGBP11216 843 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 COL6A2P12110 1019 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 CNTFP26441 200 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 TRHRP34981 398 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 SLCO1A2P46721 670 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 HERVK_113P63132 956 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ERVK-8P63133 956 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 RNF4P78317 190 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 TNFRSF17Q02223 184 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ASPHQ12797 758 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 SERTAD2Q14140 314 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 UNC50Q53HI1 259 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 LGSNQ5TDP6 509 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 FRG2Q64ET8 278 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 LETMD1Q6P1Q0 360 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ADGRD1Q6QNK2 874 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 MMP21Q8N119 569 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 MORN4Q8NDC4 146 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 OR14A16Q8NHC5 309 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 SENP5Q96HI0 755 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 GPR137Q96N19 417 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 FRG2BQ96QU4 278 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ERVK-6Q9BXR3 956 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 DEFB127Q9H1M4 99 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 EPB41L4BQ9H329 900 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 DEPPQ9NTK1 212 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 HPF1Q9NWY4 346 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 TEX10Q9NXF1 929 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 PHF11Q9UIL8 331 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 PPIEQ9UNP9 301 aaKnown RBP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 SLC12A4Q9UP95 1085 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 ERVK-19Q9WJR5 959 aa11.62□□□□□ -0.55
SMAD3-208ENST00000558827 YARS2Q9Y2Z4 477 aaKnown RBP11.62□□□□□ -0.55
SMAD3-208ENST00000558827 A0A0A6YYD5 115 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1B0GUH1 482 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 FAM166BA8MTA8 275 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 HS6ST1O60243 411 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 OR10H2O60403 315 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 DLX3O60479 287 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 UGDHO60701 494 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SLC19A2O60779 497 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SUPT7LO94864 414 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 LRATO95237 230 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 PDYNP01213 254 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SHBGP04278 402 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 RPS17P08708 135 aaKnown RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ABHD2P08910 425 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 NR2F6P10588 404 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 CHN1P15882 459 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ALOX15P16050 662 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF24P17028 368 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 TLX1P31314 330 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 STT3AP46977 705 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 PER3P56645 1201 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 RBPJQ06330 500 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 IFT88Q13099 833 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 TERF2Q15554 542 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 MRM1Q6IN84 353 aaKnown RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM64Q6YI46 380 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SIAH3Q8IW03 269 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ZCCHC7Q8N3Z6 543 aaKnown RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 CDYL2Q8N8U2 506 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF483Q8TF39 744 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 UBLCP1Q8WVY7 318 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-208ENST00000558827 SELENOMQ8WWX9 145 aa11.61□□□□□ -0.55
SMAD3-208ENST00000558827 RBM18Q96H35 190 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms