RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PTX3P26022 381 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 GRNP28799 593 aaKnown RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 TLX1P31314 330 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 BUD31P41223 144 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 STT3AP46977 705 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 ADORA2A-AS1P86434 159 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 PLIN5Q00G26 463 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 TSNAXIP1Q2TAA8 658 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 GLE1Q53GS7 698 aaKnown RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 FAM219BQ5XKK7 198 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 TTC19Q6DKK2 380 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 MTFR2Q6P444 385 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 CYP20A1Q6UW02 462 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 RPS27LQ71UM5 84 aaKnown RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 ZCCHC7Q8N3Z6 543 aaKnown RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 L3MBTL4Q8NA19 623 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 POGLUT1Q8NBL1 392 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 WDR20Q8TBZ3 569 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 ZNF721Q8TF20 911 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 CNPPD1Q9BV87 410 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 ZNF717Q9BY31 904 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 SEMA4BQ9NPR2 832 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 DEPPQ9NTK1 212 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 MS4A12Q9NXJ0 267 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 PCTPQ9UKL6 214 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 ZNF835Q9Y2P0 537 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 TSC22D4Q9Y3Q8 395 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 A0A0A6YYD5 115 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 A0A1B0GTH9 108 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 A0A1W2PR48 441 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 FAM166BA8MTA8 275 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 STX16-NPEPL1H3BU86 382 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 STX16O14662 325 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 DYRK3O43781 588 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 OR10H2O60403 315 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ZNF354AO60765 605 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 PDE9AO76083 593 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 AIFM1O95831 613 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 TPOP07202 933 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 FAM58BPP0C7Q3 252 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ALOX15P16050 662 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 TSPAN8P19075 237 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 CNTFP26441 200 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 BSGP35613 385 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 HERVK_113P63132 956 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ERVK-8P63133 956 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 IGLV3-21P80748 117 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 PLGLB1Q02325 96 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ASPHQ12797 758 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 TRAF3Q13114 568 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 CUL3Q13618 768 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ZNF750Q32MQ0 723 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 FRG2Q64ET8 278 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 RPTNQ6XPR3 784 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 FGD2Q7Z6J4 655 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ZNF808Q8N4W9 903 aaPredicted RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 AGAP11Q8TF27 550 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 TANKQ92844 425 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 UCN3Q969E3 161 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 GAL3ST4Q96RP7 486 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ERVK-6Q9BXR3 956 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 ZBTB26Q9HCK0 441 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 LYARQ9NX58 379 aaKnown RBP11.05□□□□□ -0.64
HERC1-202ENST00000558324 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 TMCO1Q9UM00 188 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 ERVK-19Q9WJR5 959 aa11.05□□□□□ -0.64
HERC1-202ENST00000558324 UNC79Q9P2D8 2635 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 A0A1B0GTL3 188 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 A8MT66 165 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 PRRG2O14669 202 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 HNRNPRO43390 633 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 PROM1O43490 865 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 SNRPB2P08579 225 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 SNRPAP09012 282 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 RHOXF2BP0C7M4 288 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 COL6A2P12110 1019 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 HTR1EP28566 365 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 NR0B1P51843 470 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 CDH13P55290 713 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 ART3Q13508 389 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 CMPK2Q5EBM0 449 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 METTL2BQ6P1Q9 378 aaKnown RBP11.04□□□□□ -0.64
HERC1-202ENST00000558324 RTL4Q6ZR62 310 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 MILR1Q7Z6M3 343 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
HERC1-202ENST00000558324 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms