RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GPATCH2Q9NW75 528 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 THUMPD1Q9NXG2 353 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ACSL6Q9UKU0 697 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 DAPP1Q9UN19 280 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 MAP4K5Q9Y4K4 846 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 V9GYQ6 96 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TECTAO75443 2155 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 H0YJX3 145 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TPST1O60507 370 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 DEAF1O75398 565 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PRKRAO75569 313 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PRKD3O94806 890 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ZBTB11O95625 1053 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 C1QCP02747 245 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 NUDT7P0C024 238 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ETFAP13804 333 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PNLIPP16233 465 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 HSPA13P48723 471 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 CDK9P50750 372 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ANXA11P50995 505 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 GFERP55789 205 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 RUNX2Q13950 521 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ELOAQ14241 798 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 LRRC23Q53EV4 343 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TCTE1Q5JU00 501 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 COX20Q5RI15 118 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 FAM180BQ6P0A1 224 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ENPP6Q6UWR7 440 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 C6orf120Q7Z4R8 191 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 UCN3Q969E3 161 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 CNRIP1Q96F85 164 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 NAF1Q96HR8 494 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PYURFQ96I23 114 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF285Q96NJ3 590 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 BTBD9Q96Q07 612 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SEMA6AQ9H2E6 1030 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SOHLH2Q9NX45 425 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ANGPT4Q9Y264 503 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 MRPS2Q9Y399 296 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 NAALAD2Q9Y3Q0 740 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 GOLGA4Q13439 2230 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 CLOCKO15516 846 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 KIF1CO43896 1103 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF682O95780 498 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 IFNA14P01570 189 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 C9P02748 559 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 CFIP05156 583 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ARAFP10398 606 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 GABRA4P48169 554 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 CCT8P50990 548 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 OR1D5P58170 312 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 DSTNP60981 165 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 TXNL4AP83876 142 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 SCARB2Q14108 478 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 DEFB110Q30KQ9 67 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 HLA-BQ31612 363 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF528Q3MIS6 628 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 SFT2D3Q587I9 215 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 GARNL3Q5VVW2 1013 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 EIF3MQ7L2H7 374 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 LRRC25Q8N386 305 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 PACRGLQ8N7B6 248 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 OR4K14Q8NGD5 310 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 OR4C6Q8NH72 309 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 FAM110BQ8TC76 370 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 SAP25Q8TEE9 199 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 N4BP2L2Q92802 583 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 C10orf90Q96M02 699 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF681Q96N22 645 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ASPSCR1Q9BZE9 553 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ZCCHC3Q9NUD5 404 aaKnown RBP11.78□□□□□ -0.52
SHMT2-233ENST00000557529 ADPRHL2Q9NX46 363 aa11.78□□□□□ -0.52
SHMT2-233ENST00000557529 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-233ENST00000557529 IGHV5-51A0A0C4DH38 117 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 WASHC1A8K0Z3 465 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 B4GAT1O43505 415 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 HCRTR1O43613 425 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 FHP07954 510 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ARL4DP49703 201 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 EMP3P54852 163 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 AQP4P55087 323 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 RAB38P57729 211 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 PRR5P85299 388 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CDK6Q00534 326 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TP53BP2Q13625 1128 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 FAM53BQ14153 422 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 C16orf72Q14CZ0 275 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 NR0B2Q15466 257 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms