RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 PCDHGA11Q9Y5H2 935 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 NINQ8N4C6 2090 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 A0A096LPK6 155 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 C19orf84I3L1E1 186 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 PLPP1O14494 284 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 UGDHO60701 494 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 C2P06681 752 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 PHBP35232 272 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 BUD31P41223 144 aaPredicted RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 STT3AP46977 705 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 PIK3CGP48736 1102 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 ARFIP1P53367 373 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 ACAP2Q15057 778 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 UAP1Q16222 522 aaPredicted RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 PFKFB4Q16877 469 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 RGS9BPQ6ZS82 235 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 GPR180Q86V85 440 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 SLC22A16Q86VW1 577 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 ZCCHC7Q8N3Z6 543 aaKnown RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 ZNF721Q8TF20 911 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 SDCCAG3Q96C92 435 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 MRRFQ96E11 262 aaKnown RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 SCYL1Q96KG9 808 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 ART5Q96L15 291 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 MTERF1Q99551 399 aaKnown RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 TTTY12Q9BZ98 90 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
SNX6-210ENST00000557341 ZDHHC18Q9NUE0 388 aa13.13□□□□□ -0.31
SNX6-210ENST00000557341 A0A0G2JMM0 328 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 A0A1W2PPB8 328 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 A0A1W2PRS3 328 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 HMX2A2RU54 273 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 PINLYPA6NC86 204 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 KIR3DP1A8MWS1 328 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 H0YIV9 168 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 KLK8O60259 260 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 PDE9AO76083 593 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 KLHL2O95198 593 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 ETHE1O95571 254 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 HNRNPH2P55795 449 aaKnown RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 FOLH1Q04609 750 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 BIKQ13323 160 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 GTF2H2Q13888 395 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 NDUFAF5Q5TEU4 345 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 GTF2H2CQ6P1K8 395 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 NUBPLQ8TB37 319 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 SLC22A8Q8TCC7 542 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 TANKQ92844 425 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 FAM173AQ9BQD7 235 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 DEFB127Q9H1M4 99 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 ACSS3Q9H6R3 686 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 SACM1LQ9NTJ5 587 aa13.12□□□□□ -0.31
SNX6-210ENST00000557341 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 TNPO3Q9Y5L0 923 aaKnown RBP13.12□□□□□ -0.31
SNX6-210ENST00000557341 POLQO75417 2590 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 G3V3Y1 287 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 ALDOAP04075 364 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 P04436 131 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 ALOX15P16050 662 aaPredicted RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 CNR1P21554 472 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 TYK2P29597 1187 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 PCBP2Q15366 365 aaKnown RBP eCLIP13.11□□□□□ -0.313e-7■■■□□ 15.7
SNX6-210ENST00000557341 CPSF6Q16630 551 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX6-210ENST00000557341 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 TECRLQ5HYJ1 363 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 TMEM211Q6ICI0 200 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 FAM47EQ6ZV65 393 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 GOLGA7Q7Z5G4 137 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 ST13P4Q8IZP2 240 aaPredicted RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 FAM109AQ8N4B1 249 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 MARVELD2Q8N4S9 558 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
SNX6-210ENST00000557341 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNX6-210ENST00000557341 LYARQ9NX58 379 aaKnown RBP13.11□□□□□ -0.31
SNX6-210ENST00000557341 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms