RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ACOT7O00154 380 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CSDE1O75534 798 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 NELFEP18615 380 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ENTPD1P49961 510 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 AAK1Q2M2I8 961 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ANKRD54Q6NXT1 300 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 PNCKQ6P2M8 343 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 FAM83FQ8NEG4 500 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 P2RY11Q96G91 374 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 COG8Q96MW5 612 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 OR2S2Q9NQN1 319 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SLC22A11Q9NSA0 550 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 B3GNT2Q9NY97 397 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CLTCL1P53675 1640 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CPED1A4D0V7 1026 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CDHR4A6H8M9 788 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NEMP2A6NFY4 417 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 PPP1R2P9O14990 202 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 EEF1E1O43324 174 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 PAGE1O75459 146 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LCKP06239 509 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SERPINE2P07093 398 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NFYAP23511 347 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 PLGLB1Q02325 96 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NAA40Q86UY6 237 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 PRR22Q8IZ63 422 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZFAND1Q8TCF1 268 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TM6SF2Q9BZW4 377 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SPATC1LQ9H0A9 340 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 WDR45Q9Y484 360 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF891A8MT65 544 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 IRAK2O43187 625 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 IMPA1P29218 277 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CSNK2A1P68400 391 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RUNX2Q13950 521 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 PLGLAQ15195 96 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FAM74A1Q5RGS3 127 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC2A7Q6PXP3 512 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CSNK2A3Q8NEV1 391 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 OR8J3Q8NGG0 315 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ADAMTS18Q8TE60 1221 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC25A36Q96CQ1 311 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 DEFB129Q9H1M3 183 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CNTN5O94779 1100 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SMAD3P84022 425 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GANABQ14697 944 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SUMF1Q8NBK3 374 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TYRP14679 529 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TNFSF4P23510 183 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CX3CR1P49238 355 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ARHGAP1Q07960 439 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TAF9Q16594 264 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CDC42EP5Q6NZY7 148 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LARP4Q71RC2 724 aaKnown RBP eCLIP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GNPDA2Q8TDQ7 276 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 AK6Q9Y3D8 172 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 INSIG1O15503 277 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FABP1P07148 127 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CRYZQ08257 329 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 KHDC1Q4VXA5 237 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 BCL2L15Q5TBC7 163 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 KCNC2Q96PR1 638 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RXFP3Q9NSD7 469 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 MAGEB4O15481 346 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CAV2P51636 162 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TANGO2Q6ICL3 276 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF695Q8IW36 515 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NLGN2Q8NFZ4 835 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF599Q96NL3 588 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GPR21Q99679 349 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 BAZ2AQ9UIF9 1905 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 P2RX1P51575 399 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ABCB8Q9NUT2 735 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CACFD1Q9UGQ2 172 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FFAR2O15552 330 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TPST2O60704 377 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RPP14O95059 124 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 DCNP07585 359 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 MLLT3P42568 568 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RAP2BP61225 183 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SNTB1Q13884 538 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 IRF4Q15306 451 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 DPPA2Q7Z7J5 298 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ACOT11Q8WXI4 607 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TMBIM1Q969X1 311 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SNX18Q96RF0 628 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 BPIFA1Q9NP55 256 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CCM2LQ9NUG4 571 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ALKBH4Q9NXW9 302 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RAI2Q9Y5P3 530 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms