RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 B3GNT6Q6ZMB0 384 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 RTL4Q6ZR62 310 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 KRT78Q8N1N4 520 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 FAM109AQ8N4B1 249 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 NKAPQ8N5F7 415 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 GOLM1Q8NBJ4 401 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 CHDHQ8NE62 594 aaPredicted RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 OR2M7Q8NG81 312 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 OR5L2Q8NGL0 311 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 OR5M3Q8NGP4 307 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 OR14A16Q8NHC5 309 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 ASB15Q8WXK1 588 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 NCLNQ969V3 563 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 KIAA1191Q96A73 305 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 LRRC39Q96DD0 335 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 CERS2Q96G23 380 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 PDLIM2Q96JY6 352 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 FAM173AQ9BQD7 235 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 RHBGQ9H310 441 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 EHD1Q9H4M9 534 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 KLHL31Q9H511 634 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 IL1RL2Q9HB29 575 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 PNO1Q9NRX1 252 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 KCMF1Q9P0J7 381 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 VTI1BQ9UEU0 232 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 SLC22A14Q9Y267 594 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 JRKLQ9Y4A0 524 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 PCDHGB3Q9Y5G1 929 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 CLDN16Q9Y5I7 305 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 VPS13CQ709C8 3753 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 GOLGA6L10A0A0M3HER8 536 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 NKX2-6A6NCS4 301 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 FAM90A27PA6NNH2 459 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 NPIPA2E9PIF3 369 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 NPIPA3F8WFD2 350 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 PGRMC1O00264 195 aaKnown RBP8.02□□□□□ -1.13
VRK1-206ENST00000557222 CYR61O00622 381 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CTNSO60931 367 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CLEC3AO75596 197 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 OR2J2O76002 312 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 PDE9AO76083 593 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 ZWINTO95229 277 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CD99P14209 185 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 GABRA1P14867 456 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 ZNF37AP17032 561 aaPredicted RBP8.02□□□□□ -1.13
VRK1-206ENST00000557222 RFC3P40938 356 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 HNF4AP41235 474 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 GPR85P60893 370 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CCZ1BP86790 482 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CCZ1P86791 482 aaPredicted RBP8.02□□□□□ -1.13
VRK1-206ENST00000557222 PLGLB1Q02325 96 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TGM3Q08188 693 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SLC13A2Q13183 592 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 RUNX2Q13950 521 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SERTAD2Q14140 314 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CYP27C1Q4G0S4 372 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CDKL4Q5MAI5 379 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 OPN5Q6U736 354 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TMIGD1Q6UXZ0 262 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 HSDL2Q6YN16 418 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TRILQ7L0X0 811 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TMPRSS11BQ86T26 416 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 ADAMTSL2Q86TH1 951 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CCDC71Q8IV32 467 aaPredicted RBP8.02□□□□□ -1.13
VRK1-206ENST00000557222 SRFBP1Q8NEF9 429 aaKnown RBP8.02□□□□□ -1.13
VRK1-206ENST00000557222 OR2L5Q8NG80 312 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 ACTRT1Q8TDG2 376 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SLCO2A1Q92959 643 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SARAFQ96BY9 339 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 MS4A6EQ96DS6 147 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TSNARE1Q96NA8 513 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 QRFPRQ96P65 431 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 RASL10BQ96S79 203 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SERINC2Q96SA4 455 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 SMC6Q96SB8 1091 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TTYH2Q9BSA4 534 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 TTTY12Q9BZ98 90 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 UCK2Q9BZX2 261 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 ROGDIQ9GZN7 287 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 AICDAQ9GZX7 198 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 DEPPQ9NTK1 212 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 B4GALT7Q9UBV7 327 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 OARD1Q9Y530 152 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CLCA3PQ9Y6N3 262 aa8.02□□□□□ -1.13
VRK1-206ENST00000557222 CTAGE15A4D2H0 777 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 ANKDD1BA6NHY2 528 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 C4orf51C9J302 202 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 CES2O00748 559 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 DNALI1O14645 258 aaPredicted RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 ERI3O43414 337 aaKnown RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 PRKNO60260 465 aaPredicted RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 CTAG2O75638 210 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 FAM155BO75949 473 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 OR6B1O95007 311 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 GLI4P10075 376 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 GGT5P36269 586 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 SOX3P41225 446 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms