RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RBM18Q96H35 190 aaKnown RBP8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PEX11GQ96HA9 241 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 CCDC115Q96NT0 180 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PANX1Q96RD7 426 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 NPAS2Q99743 824 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 ULBP3Q9BZM4 244 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 APMAPQ9HDC9 416 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 TEX10Q9NXF1 929 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-218ENST00000556343 NXT1Q9UKK6 140 aaKnown RBP8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PADI1Q9ULC6 663 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 CORO2BQ9UQ03 480 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 L3MBTL1Q9Y468 752 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PCDHGA8Q9Y5G5 932 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PCDHGA3Q9Y5H0 932 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 PCNX2A6NKB5 2137 aa8.69□□□□□ -1.02
ACTN1-218ENST00000556343 FAM186AA6NE01 2351 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 GLOD5A6NK44 160 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MYO1GB0I1T2 1018 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 C9JVG2 144 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 CYR61O00622 381 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PGRMC2O15173 223 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 OR10H2O60403 315 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 STAMBPO95630 424 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 KRT75O95678 551 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 HEXBP07686 556 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 ZCCHC18P0CG32 403 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 T-ENOLP0DO92 83 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PORP16435 677 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 CD82P27701 267 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 NCBP2P52298 156 aaKnown RBP eCLIP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MAT1AQ00266 395 aaKnown RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 TRMT5Q32P41 509 aaKnown RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 SPDYE7PQ495Y7 208 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 C3orf38Q5JPI3 329 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PRAMEF17Q5VTA0 474 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MLIPQ5VWP3 458 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 ANKRD26P1Q6NSI1 321 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 SLC2A7Q6PXP3 512 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 OVCH1Q7RTY7 1134 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 TMPRSS7Q7RTY8 843 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 DHDDSQ86SQ9 333 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PGAM4Q8N0Y7 254 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 LRRC25Q8N386 305 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 METTL27Q8N6F8 245 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 OR5T3Q8NGG3 340 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 DNAJB14Q8TBM8 379 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 METTL21AQ8WXB1 218 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 GTF2H4Q92759 462 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MR1Q95460 341 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MOAP1Q96BY2 351 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 LRRC58Q96CX6 371 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 ZNF578Q96N58 590 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 DGAT2Q96PD7 388 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 RAB3IPQ96QF0 476 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 TGIF2Q9GZN2 237 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MMADHCQ9H3L0 296 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 POLR1BQ9H9Y6 1135 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 C3orf14Q9HBI5 128 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 TAS2R9Q9NYW1 312 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-218ENST00000556343 CES1P1Q9UKY3 287 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 MAN2B2Q9Y2E5 1009 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 PADI2Q9Y2J8 665 aa8.68□□□□□ -1.02
ACTN1-218ENST00000556343 FBP2O00757 339 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PCDH17O14917 1159 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 DNAJA2O60884 412 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SNRNP200O75643 2136 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 BCAS2O75934 225 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 DNAJC8O75937 253 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 STK17BO94768 372 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 TNFSF15O95150 251 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 MED26O95402 600 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 C6orf47O95873 294 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 IGHEP01854 428 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 IFNA16P05015 189 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SLC35E2P0CK97 266 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 TNNI3P19429 210 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 ITIH1P19827 911 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 GALNSP34059 522 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 FEN1P39748 380 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 FRKP42685 505 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 ZFP36L2P47974 494 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PCBP4P57723 403 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PSME3P61289 254 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 TXNL4AP83876 142 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PRR5P85299 388 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 PLIN5Q00G26 463 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 FOLH1Q04609 750 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 MAP7Q14244 749 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 MDC1Q14676 2089 aaKnown RBP8.67□□□□□ -1.02
ACTN1-218ENST00000556343 SPATS1Q496A3 300 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 MINDY4Q4G0A6 757 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 QSOX2Q6ZRP7 698 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 RINLQ6ZS11 566 aa8.67□□□□□ -1.02
ACTN1-218ENST00000556343 CCDC116Q8IYX3 515 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms