RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MAPK12P53778 367 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 IGLV3-21P80748 117 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 CSTF3Q12996 717 aaKnown RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 CEP85LQ5SZL2 805 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 SCIMPQ6UWF3 145 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ATCAYQ86WG3 371 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 C1orf52Q8N6N3 182 aaKnown RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 C7orf57Q8NEG2 295 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 OR14A16Q8NHC5 309 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ZBTB9Q96C00 473 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 DGAT2Q96PD7 388 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ZIM3Q96PE6 472 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 DEFB126Q9BYW3 111 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ACPTQ9BZG2 426 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 SHCBP1LQ9BZQ2 653 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 OR8D2Q9GZM6 311 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 TEX10Q9NXF1 929 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ANKRD10Q9NXR5 420 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 VPS29Q9UBQ0 182 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ZNF223Q9UK11 482 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 DOCK10Q96BY6 2186 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 FASNP49327 2511 aaKnown RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 H3BQF6 201 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 COX7A2P14406 83 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 ALOX15P16050 662 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 STT3AP46977 705 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 MLF1P58340 268 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 HMGCS1Q01581 520 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 KCNC4Q03721 635 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 TUBA3CQ13748 450 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 NDUFAF5Q5TEU4 345 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 OR52E8Q6IFG1 317 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 TUBA3EQ6PEY2 450 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 GBP7Q8N8V2 638 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 MORN4Q8NDC4 146 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 SUN3Q8TAQ9 357 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 SLC2A12Q8TD20 617 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 THAP3Q8WTV1 239 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 CHTF18Q8WVB6 975 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 RBM18Q96H35 190 aaKnown RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 UTP23Q9BRU9 249 aaKnown RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 MECRQ9BV79 373 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 TNFRSF12AQ9NP84 129 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 ASF1BQ9NVP2 202 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 SENP1Q9P0U3 644 aa14.16□□□□□ -0.14
ACTN1-217ENST00000556203 COPG1Q9Y678 874 aaKnown RBP14.16□□□□□ -0.14
ACTN1-217ENST00000556203 PGRMC2O15173 223 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 TYROBPO43914 113 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 PRAMEF2O60811 474 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 VPS4BO75351 444 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 ZFAND5O76080 213 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 GPR75O95800 540 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 DDAH2O95865 285 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 SERPINB3P29508 390 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 CD96P40200 585 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 OC90Q02509 493 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-217ENST00000556203 ASPHQ12797 758 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 OR1C1Q15619 314 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 DGAT2L6Q6ZPD8 337 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 ZNF321PQ8N8H1 164 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 APIPQ96GX9 242 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 CENPHQ9H3R5 247 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 VPS4AQ9UN37 437 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 NTNG1Q9Y2I2 539 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 SPENQ96T58 3664 aaKnown RBP14.15□□□□□ -0.14
ACTN1-217ENST00000556203 SCN2AQ99250 2005 aa14.15□□□□□ -0.14
ACTN1-217ENST00000556203 FCHO1O14526 889 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 DYRK3O43781 588 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 PRKNO60260 465 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 OR10H2O60403 315 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 GUCY1B2O75343 617 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 ERLIN1O75477 346 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 BTKQ06187 659 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 BIKQ13323 160 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 SPIN4Q56A73 249 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 ZNF468Q5VIY5 522 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 RPUSD3Q6P087 351 aaKnown RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 HSDL2Q6YN16 418 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 ST13P4Q8IZP2 240 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 MMP21Q8N119 569 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 GALNT11Q8NCW6 608 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 MDS2Q8NDY4 140 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 GRHL3Q8TE85 626 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 DOK4Q8TEW6 326 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 ZNF721Q8TF20 911 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 SREK1Q8WXA9 508 aaKnown RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 TM4SF18Q96CE8 201 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 SIGLEC12Q96PQ1 595 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 PELOQ9BRX2 385 aaKnown RBP14.14□□□□□ -0.15
ACTN1-217ENST00000556203 TRMOQ9BU70 441 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 CLMPQ9H6B4 373 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 MCM8Q9UJA3 840 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 PCDHA9Q9Y5H5 950 aa14.14□□□□□ -0.15
ACTN1-217ENST00000556203 A0A1W2PS29 197 aa14.13□□□□□ -0.15
ACTN1-217ENST00000556203 SERTM1A2A2V5 107 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms