RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 NOBOXO60393 691 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF10P21506 573 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CCT3P49368 545 aaKnown RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CDK9P50750 372 aaKnown RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CRYBA2P53672 197 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 C18orf63Q68DL7 685 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 FRMPD2BQ6IN97 320 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 TMEM214Q6NUQ4 689 aaKnown RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 TMEM64Q6YI46 380 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 ABHD13Q7L211 337 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 PIWIL3Q7Z3Z3 882 aaKnown RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 C6orf120Q7Z4R8 191 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CARM1Q86X55 608 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 ZBTB44Q8NCP5 570 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 HSH2DQ96JZ2 352 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 CNBD2Q96M20 576 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 MAPKAP1Q9BPZ7 522 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 ANKRD60Q9BZ19 345 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 SMPD3Q9NY59 655 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-205ENST00000556096 PHF11Q9UIL8 331 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 PSME2Q9UL46 239 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 PADI4Q9UM07 663 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 SNX11Q9Y5W9 270 aa13.91□□□□□ -0.18
VPS33B-205ENST00000556096 LOC105369274A0A096LPK9 316 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 LOC102723532A0A0G2JNH3 316 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 LMO7DNF2Z398 122 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 G3V2T6 193 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 AQP9O43315 295 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 DPM1O60762 260 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 UBXN7O94888 489 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 HPRP00739 348 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 IFNA14P01570 189 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 PVRP15151 417 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ALDH3A2P51648 485 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 NCBP2P52298 156 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 NUBP1P53384 320 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ARSFP54793 590 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 CASP9P55211 416 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SELENOWP63302 87 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 MERTKQ12866 999 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 DAG1Q14118 895 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SPIDRQ14159 915 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SPDYE7PQ495Y7 208 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 CYBRD1Q53TN4 286 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 TBPL2Q6SJ96 375 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 GALNT10Q86SR1 603 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ZNF761Q86XN6 746 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 OR4N4Q8N0Y3 316 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 NFKBIDQ8NI38 313 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 MAGEE2Q8TD90 523 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 CNRIP1Q96F85 164 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 DOHHQ9BU89 302 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 KLHL25Q9H0H3 589 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 A4GALTQ9NPC4 353 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 THUMPD1Q9NXG2 353 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 MS4A12Q9NXJ0 267 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 KCMF1Q9P0J7 381 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ENTPD4Q9Y227 616 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ANGPT4Q9Y264 503 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 GLOD5A6NK44 160 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 EIF4E1BA6NMX2 242 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 TMEM229AB2RXF0 380 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 B4GALT2O60909 372 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ERAL1O75616 437 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 FABP3P05413 133 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 NR2F6P10588 404 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 TYRP1P17643 537 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 RXRGP48443 463 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SLC36A3Q495N2 470 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 CEACAM20Q6UY09 585 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 STK32CQ86UX6 486 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ZC3H7AQ8IWR0 971 aaKnown RBP13.9□□□□□ -0.18
VPS33B-205ENST00000556096 HORMAD2Q8N7B1 307 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SUN3Q8TAQ9 357 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SFXN5Q8TD22 340 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 MOAP1Q96BY2 351 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 RDH12Q96NR8 316 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 ADI1Q9BV57 179 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 SEMA3GQ9NS98 782 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 USE1Q9NZ43 259 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 PDP2Q9P2J9 529 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 BAG5Q9UL15 447 aa13.9□□□□□ -0.18
VPS33B-205ENST00000556096 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms