RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NEURL3Q96EH8 262 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZBED6CLQ96FA7 236 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SHDQ96IW2 340 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 KCNC2Q96PR1 638 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 MYOCQ99972 504 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ORAI3Q9BRQ5 295 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SLC35A5Q9BS91 424 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ADI1Q9BV57 179 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 FAIM2Q9BWQ8 316 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 SORBS1Q9BX66 1292 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 YTHDF1Q9BYJ9 559 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 NLNQ9BYT8 704 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ROGDIQ9GZN7 287 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 AICDAQ9GZX7 198 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 C6orf106Q9H6K1 298 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 TM9SF3Q9HD45 589 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 PNPLA3Q9NST1 481 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 POT1Q9NUX5 634 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZSCAN32Q9NX65 697 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 PNMA8BQ9ULN7 279 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 NDRG2Q9UN36 371 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ZNF451Q9Y4E5 1061 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 ASB4Q9Y574 426 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
ATXN3-235ENST00000556082 NUMA1Q14980 2115 aa7.87□□□□□ -1.15
ATXN3-235ENST00000556082 PRAMEF33A0A0G2JMD5 474 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 TRIM64A6NGJ6 449 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ISM1B1AKI9 464 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 PDLIM1O00151 329 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 RTCAO00442 366 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 BTN3A3O00478 584 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 EI24O14681 340 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 HAT1O14929 419 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 NOBOXO60393 691 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 H6PDO95479 791 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 WNT11O96014 354 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CST1P01037 141 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 IFNA14P01570 189 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 HIST1H1TP22492 207 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ATP5A1P25705 553 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 RGS19P49795 217 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 STXBP1P61764 594 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CYP4F2P78329 520 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ADARB1P78563 741 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 PPP2R2BQ00005 443 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 MYBPC1Q00872 1141 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 TFF2Q03403 129 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 FZD2Q14332 565 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 SLC9A5Q14940 896 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 SLC5A12Q1EHB4 618 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 IQCCQ4KMZ1 466 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CYBRD1Q53TN4 286 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CRB2Q5IJ48 1285 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 GCNT6Q5T4J0 391 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 SAXO2Q658L1 398 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 FBXO42Q6P3S6 717 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 SLC30A9Q6PML9 568 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 Q6ZS52 159 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ADCK2Q7Z695 626 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 IQCHQ86VS3 1027 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 HIPK1Q86Z02 1210 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 SLC22A18ASQ8N1D0 253 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 FBXL6Q8N531 539 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 DHRSXQ8N5I4 330 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 METTL25Q8N6Q8 603 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ACOT4Q8N9L9 421 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 AVL9Q8NBF6 648 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CADM4Q8NFZ8 388 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 OR5K1Q8NHB7 308 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 VPS50Q96JG6 964 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CNBD2Q96M20 576 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 TEFMQ96QE5 360 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 OR2A14Q96R47 310 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 DOHHQ9BU89 302 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 GABARAPL1Q9H0R8 117 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 ADPRHL2Q9NX46 363 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 LYARQ9NX58 379 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 THUMPD1Q9NXG2 353 aaKnown RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 NDUFA13Q9P0J0 144 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 IFT80Q9P2H3 777 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 FAF1Q9UNN5 650 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-235ENST00000556082 CYP8B1Q9UNU6 501 aa7.86□□□□□ -1.15
ATXN3-235ENST00000556082 IGHV1OR15-9A0A0B4J2B8 117 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 METTL12A8MUP2 240 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 MYO1GB0I1T2 1018 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 H3BNH8 94 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 GNGT2O14610 69 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 EREGO14944 169 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PDPK1O15530 556 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 ZW10O43264 779 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SUV39H1O43463 412 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 GCM2O75603 506 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 VIPP01282 170 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 C1QCP02747 245 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PABPC4LP0CB38 370 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 THEGLP0DJG4 465 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SMIM10L1P0DMW3 83 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms