RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 ANKRD9Q96BM1 317 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 MARK4Q96L34 752 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 PTCHD1Q96NR3 888 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 VN1R1Q9GZP7 353 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 CLMPQ9H6B4 373 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SLC35C2Q9NQQ7 365 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 GIMAP4Q9NUV9 329 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SH3BP4Q9P0V3 963 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 C3orf18Q9UK00 162 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 UTS2RQ9UKP6 389 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 TCFL5Q9UL49 500 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 CACNA1AO00555 2505 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 LOC101059948A0A1B0GTJ6 334 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 DYTNA2CJ06 578 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 FAM234BA2RU67 622 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 WASHC1A8K0Z3 465 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 IDSB3KWA1 339 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 FCHO1O14526 889 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 SLC35E2P0CK97 266 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 CSNK2A2P19784 350 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 MPIP34949 423 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 FOLR3P41439 243 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 XKP51811 444 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 POLR2JP52435 117 aaKnown RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 HNRNPFP52597 415 aaKnown RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 NME5P56597 212 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 BTG2P78543 158 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 IGLV3-21P80748 117 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 FOLH1Q04609 750 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 SSPNQ14714 243 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 NSDHLQ15738 373 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 CEBPEQ15744 281 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 UGT8Q16880 541 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 MFSD4BQ5TF39 518 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 ANXA8L1Q5VT79 327 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 PAOXQ6QHF9 649 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 PRSS58Q8IYP2 241 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 SHISA5Q8N114 240 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 MMP21Q8N119 569 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 ZNF248Q8NDW4 579 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 OR8J2Q8NGG1 315 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 METTL21AQ8WXB1 218 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 UCN3Q969E3 161 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 KLHL29Q96CT2 875 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 TEX37Q96LM6 180 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 LRRC37BQ96QE4 947 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 PELOQ9BRX2 385 aaKnown RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 ALOXE3Q9BYJ1 711 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 RBCK1Q9BYM8 510 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 DPH1Q9BZG8 443 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 NMUR2Q9GZQ4 415 aa11.71□□□□□ -0.53
SHMT2-221ENST00000555773 CCDC86Q9H6F5 360 aaKnown RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 GPN2Q9H9Y4 310 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-221ENST00000555773 IGKV3D-11A0A0A0MRZ8 115 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 MYO1GB0I1T2 1018 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 FGF17O60258 216 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 LDB3O75112 727 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ALOX12BO75342 701 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ERAL1O75616 437 aaKnown RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 CDC123O75794 336 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 LAMP1P11279 417 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 PORP16435 677 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 IL12AP29459 219 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 S100A3P33764 101 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 GALNSP34059 522 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 KIR3DL1P43629 444 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 LRRC74AQ0VAA2 488 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 PGS1Q32NB8 556 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 AGKQ53H12 422 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 TMEM205Q6UW68 189 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 OR4N5Q8IXE1 308 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ST13P4Q8IZP2 240 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 OR7A2PQ8NGA2 310 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 EXOSC8Q96B26 276 aaKnown RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 RBM18Q96H35 190 aaKnown RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 VPS50Q96JG6 964 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF681Q96N22 645 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 DUSP26Q9BV47 211 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 MYLK2Q9H1R3 596 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ACSS1Q9NUB1 689 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 C19orf25Q9UFG5 118 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-221ENST00000555773 ENTPD4Q9Y227 616 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 SCN3AQ9NY46 2000 aa11.7□□□□□ -0.54
SHMT2-221ENST00000555773 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CEP295Q9C0D2 2601 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 PRSS51A0A1B0GVH4 220 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 TCRBV16S1A1N1A0A5B0 115 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms