RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SELENOMQ8WWX9 145 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 DAZLQ92904 295 aaKnown RBP19.09■□□□□ 0.65
VTI1B-205ENST00000555543 SCMH1Q96GD3 660 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 OR8D2Q9GZM6 311 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 LIN28AQ9H9Z2 209 aaKnown RBP19.09■□□□□ 0.65
VTI1B-205ENST00000555543 TEX10Q9NXF1 929 aaPredicted RBP19.09■□□□□ 0.65
VTI1B-205ENST00000555543 LRFN1Q9P244 771 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 SVILO95425 2214 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 POLEQ07864 2286 aa19.08■□□□□ 0.65
VTI1B-205ENST00000555543 C17orf105B2RV13 164 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 PLIN3O60664 434 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 CDH16O75309 829 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 RNF224P0DH78 156 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 EDN3P14138 238 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 TRHRP34981 398 aaPredicted RBP19.08■□□□□ 0.64
VTI1B-205ENST00000555543 BUD31P41223 144 aaPredicted RBP19.08■□□□□ 0.64
VTI1B-205ENST00000555543 STT3AP46977 705 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 ZYG11AQ6WRX3 759 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 GPRIN3Q6ZVF9 776 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 METTL4Q8N3J2 472 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 MORN4Q8NDC4 146 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 SLC2A12Q8TD20 617 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 NR4A3Q92570 626 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 TANKQ92844 425 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 GSTO2Q9H4Y5 243 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 TRIM45Q9H8W5 580 aaPredicted RBP19.08■□□□□ 0.64
VTI1B-205ENST00000555543 SNX6Q9UNH7 406 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 SLC12A4Q9UP95 1085 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 PCDHGB6Q9Y5F9 930 aa19.08■□□□□ 0.64
VTI1B-205ENST00000555543 A0A1W2PS29 197 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 MANBAO00462 879 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 FCHO1O14526 889 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 ITGA10O75578 1167 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 WISP2O76076 250 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 AGFG2O95081 481 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 KLK1P06870 262 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 NUDT17P0C025 328 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 TNNI3P19429 210 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 MST1P26927 711 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 TLX1P31314 330 aaPredicted RBP19.07■□□□□ 0.64
VTI1B-205ENST00000555543 HTR6P50406 440 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 GALNT1Q10472 559 aaPredicted RBP19.07■□□□□ 0.64
VTI1B-205ENST00000555543 TBL3Q12788 808 aaKnown RBP19.07■□□□□ 0.64
VTI1B-205ENST00000555543 LCP2Q13094 533 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 WDR93Q6P2C0 686 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 COMMD6Q7Z4G1 85 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 C4orf33Q8N1A6 199 aa19.07■□□□□ 0.64
VTI1B-205ENST00000555543 PPWD1Q96BP3 646 aaKnown RBP19.07■□□□□ 0.64
VTI1B-205ENST00000555543 ARHGAP10A1A4S6 786 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 HRKO00198 91 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 PGRMC2O15173 223 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 SLC25A12O75746 678 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 ZFAND5O76080 213 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 MLYCDO95822 493 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 SP1P08047 785 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 MYL2P10916 166 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 CD46P15529 392 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 KRT4P19013 534 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 CRHR1P34998 444 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 CYB561P49447 251 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 HLCSP50747 726 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 ELOAQ14241 798 aaKnown RBP19.06■□□□□ 0.64
VTI1B-205ENST00000555543 GALNTL5Q7Z4T8 443 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 CCNYL1Q8N7R7 359 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 DOK4Q8TEW6 326 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 ZNF721Q8TF20 911 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 C5orf34Q96MH7 638 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 DGAT2Q96PD7 388 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 KCNA7Q96RP8 456 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 BRF2Q9HAW0 419 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 ADAM29Q9UKF5 820 aa19.06■□□□□ 0.64
VTI1B-205ENST00000555543 TLDC2A0PJX2 215 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 UBFD1O14562 309 aaKnown RBP19.05■□□□□ 0.64
VTI1B-205ENST00000555543 GPR75O95800 540 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 CHN1P15882 459 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 ALOX15P16050 662 aaPredicted RBP19.05■□□□□ 0.64
VTI1B-205ENST00000555543 CCT5P48643 541 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 PLIN5Q00G26 463 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 SLC18A2Q05940 514 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 CCDC153Q494R4 210 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 SLC25A25Q6KCM7 469 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 HSDL2Q6YN16 418 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 HORMAD2Q8N7B1 307 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 AGAP11Q8TF27 550 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 AHSPQ9NZD4 102 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 ERRFI1Q9UJM3 462 aaPredicted RBP19.05■□□□□ 0.64
VTI1B-205ENST00000555543 GRID1Q9ULK0 1009 aa19.05■□□□□ 0.64
VTI1B-205ENST00000555543 ASPDHA6ND91 283 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 CDK2AP1O14519 115 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 COPEO14579 308 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 NME2P1O60361 137 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 OR2J2O76002 312 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 CRYABP02511 175 aaKnown RBP19.04■□□□□ 0.64
VTI1B-205ENST00000555543 KRT6AP02538 564 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 KRT6BP04259 564 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 IGKV3-11P04433 115 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 COX7A2P14406 83 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 NME2P22392 152 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 KRT6CP48668 564 aa19.04■□□□□ 0.64
VTI1B-205ENST00000555543 HK2P52789 917 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms