RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 XPO4Q9C0E2 1151 aaKnown RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 PARLQ9H300 379 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 PLEKHA3Q9HB20 300 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 GDF3Q9NR23 364 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 HOMER3Q9NSC5 361 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 FAM212BQ9NTI7 297 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 FAM153AQ9UHL3 310 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 HOOK1Q9UJC3 728 aaKnown RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 DNPEPQ9ULA0 475 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 EIF4G1Q04637 1599 aaKnown RBP4.53□□□□□ -1.69
CKS1BP1-201ENST00000555221 NCAPD3P42695 1498 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 FGD5Q6ZNL6 1462 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 KRT87PA6NCN2 255 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 OR5H15A6NDH6 313 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 DCXO43602 365 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 IDH3BO43837 385 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 PGK2P07205 417 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 APRTP07741 180 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 HIST1H2AGP0C0S8 130 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 PPP2R1AP30153 589 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 SFNP31947 248 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 CLK1P49759 484 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 ERVK11-1P61568 191 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 RIGQ13278 110 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 PDK1Q15118 436 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 GPAT3Q53EU6 434 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 HERC4Q5GLZ8 1057 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 TOR1AIP1Q5JTV8 583 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 ZNF613Q6PF04 617 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 Q6ZRG5 221 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 CDHR3Q6ZTQ4 885 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 TAF8Q7Z7C8 310 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MRPL43Q8N983 215 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 AQP11Q8NBQ7 271 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 OR52E1Q8NGJ3 308 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 C11orf45Q8TAV5 145 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 U2AF1L4Q8WU68 220 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 HIST1H2ACQ93077 130 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 C11orf52Q96A22 123 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MRPL24Q96A35 216 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MRPL53Q96EL3 112 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MOCOSQ96EN8 888 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 CDHR1Q96JP9 859 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 NSMCE2Q96MF7 247 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 RUNDC3BQ96NL0 473 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 ZNF577Q9BSK1 485 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 NUDT4Q9NZJ9 180 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 ERVK-18Q9QC07 812 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 ASIC3Q9UHC3 531 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 DIMT1Q9UNQ2 313 aaKnown RBP4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 MYH15Q9Y2K3 1946 aa4.52□□□□□ -1.69
CKS1BP1-201ENST00000555221 KIF26BQ2KJY2 2108 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 CFAP73A6NFT4 308 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ARPC1BO15143 372 aaKnown RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 SSX5O60225 188 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 CSO75390 466 aaKnown RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ANXA9O76027 345 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 CXCL10P02778 98 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 MBL2P11226 248 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 DPEP1P16444 411 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ACP1P24666 158 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 MAPK3P27361 379 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 LIMK2P53671 638 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 HILS1P60008 231 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 NFATC2Q13469 925 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 EXOSC7Q15024 291 aaKnown RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 CARTPTQ16568 116 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ECSCRQ19T08 205 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 KNOP1Q1ED39 458 aaKnown RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 EPC2Q52LR7 807 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 C2CD6Q53TS8 623 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 NEPROQ6NW34 567 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 CDC42EP5Q6NZY7 148 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 MFSD7Q6UXD7 560 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 KDM8Q8N371 416 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 PARP8Q8N3A8 854 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ICA1LQ8NDH6 482 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 PRICKLE1Q96MT3 831 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 DCTN5Q9BTE1 182 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 FTHL17Q9BXU8 183 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 C1orf21Q9H246 121 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 IL1RAPQ9NPH3 570 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 NDUFA13Q9P0J0 144 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 COPS7AQ9UBW8 275 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 SMARCA2P51531 1590 aa4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 BAZ1AQ9NRL2 1556 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP1-201ENST00000555221 ASB14A6NK59 587 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 H7C423 109 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SOCS3O14543 225 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 REC8O95072 547 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SYNGR4O95473 234 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 FHP07954 510 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 CD1DP15813 335 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 SELEP16581 610 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 ACADSBP45954 432 aa4.5□□□□□ -1.69
CKS1BP1-201ENST00000555221 NUMBP49757 651 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms