RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MAZP56270 477 aaKnown RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 VLDLRP98155 873 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 RPL6Q02878 288 aaKnown RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 FUT5Q11128 374 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 RUNX2Q13950 521 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SLC9A5Q14940 896 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 NR1D2Q14995 579 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 CYBRD1Q53TN4 286 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MANEAQ5SRI9 462 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SLC36A4Q6YBV0 504 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ZBTB49Q6ZSB9 765 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 KANSL1Q7Z3B3 1105 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ARL14Q8N4G2 192 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TAMM41Q96BW9 452 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 GIMAP5Q96F15 307 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 HSH2DQ96JZ2 352 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MBOAT4Q96T53 435 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ZFYVE21Q9BQ24 234 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 RAB33BQ9H082 229 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ZNF696Q9H7X3 374 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 FAM60AQ9NP50 221 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SLC35C2Q9NQQ7 365 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 NUP214P35658 2090 aaPredicted RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 PVRP15151 417 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 CD247P20963 164 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MYF6P23409 242 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 LIM2P55344 173 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ITGA1P56199 1179 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TNFRSF17Q02223 184 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MED21Q13503 144 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 APOFQ13790 326 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MAP7Q14244 749 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TEAD4Q15561 434 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 GCNT6Q5T4J0 391 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TRIM40Q6P9F5 258 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ZNF605Q86T29 641 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 DNAJC22Q8N4W6 341 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TBC1D19Q8N5T2 526 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TRIML2Q8N7C3 387 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 ARL10Q8N8L6 244 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SFXN5Q8TD22 340 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 PPWD1Q96BP3 646 aaKnown RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 DHRS1Q96LJ7 313 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SERINC2Q96SA4 455 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 BDH2Q9BUT1 245 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 OSBPL10Q9BXB5 764 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SEMA6CQ9H3T2 930 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 SPASTQ9UBP0 616 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MAGED1Q9Y5V3 778 aaPredicted RBP8.41□□□□□ -1.06
TDP1-210ENST00000554976 RNF103-CHMP3A0A140T963 221 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 H0YGG7 62 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 AXIN1O15169 862 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 DCNP07585 359 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 CAPZBP47756 277 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 GCGRP47871 477 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 PSMD7P51665 324 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 RAB8AP61006 207 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ARF3P61204 181 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ELOCQ15369 112 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ZNF750Q32MQ0 723 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 VTCN1Q7Z7D3 282 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ZNF761Q86XN6 746 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 MAML2Q8IZL2 1156 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 SRFBP1Q8NEF9 429 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 OR10Q1Q8NGQ4 319 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 NFKBIDQ8NI38 313 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 CSF3RQ99062 836 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 RAD21L1Q9H4I0 556 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 RAPGEFL1Q9UHV5 662 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 RPS6KA6Q9UK32 745 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 KMT2EQ8IZD2 1858 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 CCDC163A0A0D9SF12 145 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 GSAPA4D1B5 854 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 MED26O95402 600 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 KRT75O95678 551 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ST6GAL1P15907 406 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 DCTP40126 519 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 LIMS1P48059 325 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ALDH3A2P51648 485 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 CHN2P52757 468 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 IST1P53990 364 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ARSFP54793 590 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 SELENOWP63302 87 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 SCARB2Q14108 478 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ZNF630Q2M218 657 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 FHL5Q5TD97 284 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 ANKRD34AQ69YU3 496 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 SHQ1Q6PI26 577 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 PRSS41Q7RTY9 318 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 TRIM48Q8IWZ4 208 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 C11orf65Q8NCR3 313 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms