RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OR4E2Q8NGC2 313 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 CPNE2Q96FN4 548 aaPredicted RBP13.39□□□□□ -0.27
VTI1B-204ENST00000554659 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM98Q9Y2Y6 226 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 NFKBIEO00221 500 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 APOC3P02656 99 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 CD9P21926 228 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
VTI1B-204ENST00000554659 CDK10Q15131 360 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 ISCA2Q86U28 154 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 OR13J1Q8NGT2 312 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF778Q96MU6 729 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 C16orf70Q9BSU1 422 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 ABI3Q9P2A4 366 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 KCNK6Q9Y257 313 aa13.39□□□□□ -0.27
VTI1B-204ENST00000554659 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
VTI1B-204ENST00000554659 BLOC1S5-TXNDC5H3BN57 136 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MEF2AQ02078 507 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 OR4K14Q8NGD5 310 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MFSD8Q8NHS3 518 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 RPLP0P6Q8NHW5 317 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM41AQ96HV5 264 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 TIMM8BQ9Y5J9 83 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MRPS14O60783 128 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 PTTG1O95997 202 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ALPPL2P10696 532 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MCCD1P59942 119 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 CRHR2Q13324 411 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 CCDC58Q4VC31 144 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SUN3Q8TAQ9 357 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MAGED1Q9Y5V3 778 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 WASH3PC4AMC7 463 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 F5H0A9 414 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 TOXO94900 526 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 HCKP08631 526 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 GKP32189 559 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 EIF1AXP47813 144 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 CDKN1CP49918 316 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 IRF5Q13568 498 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 PNCKQ6P2M8 343 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 TIGD4Q8IY51 512 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 FAM86B1Q8N7N1 296 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 OR52B6Q8NGF0 335 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 GLYATL1Q969I3 302 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 WNT6Q9Y6F9 365 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 HYKKA2RU49 373 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 UNC119BA6NIH7 251 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SCAMP2O15127 329 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 TSPAN6O43657 245 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 AHSA1O95433 338 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 IFNA2P01563 188 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 GP1BBP13224 206 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 GLP1RP43220 463 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ARSDP51689 593 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 HK3P52790 923 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MLLT10P55197 1068 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 GRHL2Q6ISB3 625 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 NPWQ8N729 165 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 PHOSPHO1Q8TCT1 267 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 LRIG1Q96JA1 1093 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SECISBP2Q96T21 854 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF649Q9BS31 505 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 DHRS4Q9BTZ2 278 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 MCCC2Q9HCC0 563 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
VTI1B-204ENST00000554659 PAQR5Q9NXK6 330 aaPredicted RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 NDRG2Q9UN36 371 aaKnown RBP13.38□□□□□ -0.27
VTI1B-204ENST00000554659 SOD2P04179 222 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 NSMAFQ92636 917 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 GATA6Q92908 595 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 NELL2Q99435 816 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 PFDN5Q99471 154 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 IGKV6-21A0A0C4DH24 114 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF705EA8MWA4 302 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 H7BY64 318 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 INPPL1O15357 1258 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
VTI1B-204ENST00000554659 OR2B3O76000 313 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 HRH2P25021 359 aa13.37□□□□□ -0.27
VTI1B-204ENST00000554659 SHMT2P34897 504 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms