RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RGS21Q2M5E4 152 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KRTAP27-1Q3LI81 207 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF404Q494X3 552 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GTDC1Q4AE62 458 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TIGD2Q4W5G0 525 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 AGAP6Q5VW22 663 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 STEAP3Q658P3 488 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CASC4Q6P4E1 433 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM81Q6P7N7 255 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF782Q6ZMW2 699 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SPATC1Q76KD6 591 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 C16orf59Q7L2K0 433 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 P2RY8Q86VZ1 359 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CLVS1Q8IUQ0 354 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FAM20CQ8IXL6 584 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ARMC10Q8N2F6 343 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FNDC5Q8NAU1 212 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF480Q8WV37 535 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MYDGFQ969H8 173 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GLYATL1Q969I3 302 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TUBGCP3Q96CW5 907 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PHF21BQ96EK2 531 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SCMH1Q96GD3 660 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MED30Q96HR3 178 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SCYL1Q96KG9 808 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 AGAP4Q96P64 663 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 STACQ99469 402 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ATF6BQ99941 703 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 EMILIN2Q9BXX0 1053 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SEMA6AQ9H2E6 1030 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SYNPO2LQ9H987 977 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NEUROD4Q9HD90 331 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SEMA4BQ9NPR2 832 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TBC1D23Q9NUY8 699 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PHF11Q9UIL8 331 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 YBX2Q9Y2T7 364 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 HCN4Q9Y3Q4 1203 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TIMM22Q9Y584 194 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MAGED1Q9Y5V3 778 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KLF2Q9Y5W3 355 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PRAMEF33A0A0G2JMD5 474 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PIPSLA2A3N6 862 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RNF222A6NCQ9 220 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM247A6NEH6 219 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZBBXA8MT70 800 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CEACAM18A8MTB9 384 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 E7EQ34 232 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PLPP1O14494 284 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SURF4O15260 269 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 DYRK3O43781 588 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KIAA0513O60268 411 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PRAMEF10O60809 474 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NDUFS3O75489 264 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 WISP2O76076 250 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PDE9AO76083 593 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SLC25A14O95258 325 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 BAG2O95816 211 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TIMP1P01033 207 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CYC1P08574 325 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 OR56A5P0C7T3 313 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF182P17025 639 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SYN1P17600 705 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CYP2A7P20853 494 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CD72P21854 359 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 EPHA2P29317 976 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 IFNGR2P38484 337 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CTSKP43235 329 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NR4A2P43354 598 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SESN3P58005 492 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SNRPD1P62314 119 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 C16orf72Q14CZ0 275 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TRAM1Q15629 374 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 XKR6Q5GH73 641 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FAM109BQ6ICB4 259 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KRT80Q6KB66 452 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 USP45Q70EL2 814 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PAQR7Q86WK9 346 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GPALPP1Q8IXQ4 340 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ABI1Q8IZP0 508 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CARFQ8N187 725 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 OR10A6Q8NH74 314 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RNF34Q969K3 372 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF668Q96K58 619 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SMIM14Q96QK8 99 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ORAI3Q9BRQ5 295 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GTPBP2Q9BX10 602 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SLC46A2Q9BY10 475 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 REXO4Q9GZR2 422 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF350Q9GZX5 532 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 LMAN2LQ9H0V9 348 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 LYRM4Q9HD34 91 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 EXOSC3Q9NQT5 275 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MRPL17Q9NRX2 175 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ADA2Q9NZK5 511 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 THAP10Q9P2Z0 257 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PISDQ9UG56 409 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ST6GALNAC2Q9UJ37 374 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CRYL1Q9Y2S2 319 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms