RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RRP1BQ14684 758 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TYSND1Q2T9J0 566 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF662Q6ZS27 426 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CPNE9Q8IYJ1 553 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TXNDC5Q8NBS9 432 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TCP10LQ8TDR4 215 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FZR1Q9UM11 496 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FADS2P1A8MWK0 482 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GYPCP04921 128 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DGKAP23743 735 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CD1CP29017 333 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MAPK12P53778 367 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZXDAP98168 799 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM17Q86X19 198 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CELF5Q8N6W0 485 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF709Q8N972 641 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ASCC1Q8N9N2 400 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DAGLBQ8NCG7 672 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TRPV1Q8NER1 839 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SGMS2Q8NHU3 365 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PLEKHO2Q8TD55 490 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR51B5Q9H339 312 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 AKAP3O75969 853 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FTH1P02794 183 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HCAR3P49019 387 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OPCMLQ14982 345 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TAC4Q86UU9 113 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 AMIGO3Q86WK7 504 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 C12orf45Q8N5I9 185 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 REPS2Q8NFH8 660 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DQX1Q8TE96 717 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HTR3CQ8WXA8 447 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 Q96MT0 163 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DEFB126Q9BYW3 111 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CALHM2Q9HA72 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SIDT1Q9NXL6 827 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PTTG3PQ9NZH4 202 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF175Q9Y473 711 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR1A2Q9Y585 309 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MEGF6O75095 1541 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HTR3EA5X5Y0 456 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BTBD17A6NE02 478 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IFNA2P01563 188 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ITIH1P19827 911 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NR1H2P55055 460 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 LGALS4P56470 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC6A3Q01959 620 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FASTKD3Q14CZ7 662 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM225Q6GV28 225 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MEX3BQ6ZN04 569 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SYVN1Q86TM6 617 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZC3HC1Q86WB0 502 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IFNL1Q8IU54 200 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CRISPLD2Q9H0B8 497 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NECTIN3Q9NQS3 549 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ADGRE2Q9UHX3 823 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SAMD4AQ9UPU9 718 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC22A14Q9Y267 594 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RHBDD3Q9Y3P4 386 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TRPM1Q7Z4N2 1603 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TNFRSF11BO00300 401 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TGFB1P01137 390 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CD3GP09693 182 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RPL5P46777 297 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NIPAL3Q6P499 406 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM71Q6P5X7 295 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FRMD7Q6ZUT3 714 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF677Q86XU0 584 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZBTB2Q8N680 514 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KCTD15Q96SI1 283 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC39A3Q9BRY0 314 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TTPALQ9BTX7 342 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CLEC4EQ9ULY5 219 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZMYM2Q9UBW7 1377 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLCO1B7G3V0H7 640 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FANCGO15287 622 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TNFP01375 233 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CRYBA1P05813 215 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HADHBP55084 474 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DLX2Q07687 328 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 VARS2Q5ST30 1063 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PLEKHG7Q6ZR37 379 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KIAA0907Q7Z7F0 614 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RIOX2Q8IUF8 465 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR2M4Q96R27 311 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF358Q9NW07 568 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLCO3A1Q9UIG8 710 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PCDHGA9Q9Y5G4 932 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OVOS2A0A0G2JMS6 1433 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OVOS2A0A0J9YW53 1432 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OVOS2Q6IE36 1432 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FAM170BA6NMN3 283 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 PPP1R3GB7ZBB8 358 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 F5H697 171 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 hCG_1984214I3L0E3 225 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 F2P00734 622 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 KELP23276 732 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 SPDYCQ5MJ68 293 aa3.17□□□□□ -1.9
SYNE2-212ENST00000554584 ARCQ7LC44 396 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms