RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CHI3L1P36222 383 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 CRYBA2P53672 197 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SNRPNP63162 240 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 RACK1P63244 317 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 REEP5Q00765 189 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 HSPB3Q12988 150 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 LRRC32Q14392 662 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SERPINA11Q86U17 422 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 PACRGLQ8N7B6 248 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 DNAJB8Q8NHS0 232 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 TXNDC15Q96J42 360 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 MAGED4Q96JG8 741 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 HSH2DQ96JZ2 352 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 TEFMQ96QE5 360 aaKnown RBP11.11□□□□□ -0.63
SHMT2-212ENST00000554467 BTBD2Q9BX70 525 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 ATP6V1HQ9UI12 483 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 PRELID1Q9Y255 219 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 SPTBP11277 2137 aa11.11□□□□□ -0.63
SHMT2-212ENST00000554467 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 BTN3A3O00478 584 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NDUFS4O43181 175 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 SCO2O43819 266 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 RETP07949 1114 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 KDELR2P33947 212 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 RAB8AP61006 207 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ADARB1P78563 741 aaKnown RBP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 VLDLRP98155 873 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 MEP1AQ16819 746 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ANXA8L1Q5VT79 327 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 KIAA1614Q5VZ46 1190 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 MSANTD1Q6ZTZ1 278 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 OR10G6Q8NH81 332 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 LCN9Q8WX39 176 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NEK6Q9HC98 313 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 HMG20AQ9NP66 347 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 MYNNQ9NPC7 610 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF624Q9P2J8 865 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 BTNL2Q9UIR0 455 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 PRAMEF10O60809 474 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 UGT2B11O75310 529 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ALDH4A1P30038 563 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 CCINQ13939 588 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 WDR45BQ5MNZ6 344 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 CCDC81Q6ZN84 652 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 Q6ZSR6 202 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 RAB42Q8N4Z0 105 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 OR8K5Q8NH50 307 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 HTRA1Q92743 480 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 FAM131CQ96AQ9 280 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 TM4SF18Q96CE8 201 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 TPSD1Q9BZJ3 242 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 TOR3AQ9H497 397 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 PELI2Q9HAT8 420 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 DNAJB9Q9UBS3 223 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 FANCMQ8IYD8 2048 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 GPR89AB7ZAQ6 455 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NME6O75414 186 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 CCNDBP1O95273 360 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 GPR89BP0CG08 455 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 SSR2P43308 183 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 OR1E2P47887 323 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NFATC4Q14934 902 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF750Q32MQ0 723 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF793Q6ZN11 406 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 GPR155Q7Z3F1 870 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NFKBIDQ8NI38 313 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 NACC2Q96BF6 587 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 VMP1Q96GC9 406 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 BHLHE41Q9C0J9 482 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-212ENST00000554467 CXorf36Q9H7Y0 433 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 CA14Q9ULX7 337 aa11.1□□□□□ -0.63
SHMT2-212ENST00000554467 A0A1W2PS29 197 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 MITFO75030 526 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ALPLP05186 524 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 THRBP10828 461 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 UBL4AP11441 157 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PIGAP37287 484 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 MVDP53602 400 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 C21orf58P58505 322 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 COPZ1P61923 177 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 MRPS21P82921 87 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 DAG1Q14118 895 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 TNFAIP8L2Q6P589 184 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CEP68Q76N32 757 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SLCO6A1Q86UG4 719 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SPARTQ8N0X7 666 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SHISA5Q8N114 240 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SYNPOQ8N3V7 929 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 OR2L3Q8NG85 312 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 METTL2AQ96IZ6 378 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms