RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 PAOXQ6QHF9 649 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 RGS9BPQ6ZS82 235 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 GOLGA7Q7Z5G4 137 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 OR4N5Q8IXE1 308 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 EID3Q8N140 333 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 PLD6Q8N2A8 252 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 RNF175Q8N4F7 328 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 ZNF321PQ8N8H1 164 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 OR52N2Q8NGI0 321 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 FAM57AQ8TBR7 257 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 WDR20Q8TBZ3 569 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 SLC2A12Q8TD20 617 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 SLC44A1Q8WWI5 657 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 REPS1Q96D71 796 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 MTERF1Q99551 399 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 SORBS1Q9BX66 1292 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 DDX31Q9H8H2 851 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 IPPKQ9H8X2 491 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 ACTR8Q9H981 624 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 DMRT3Q9NQL9 472 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 MTRF1LQ9UGC7 380 aaKnown RBP10.31□□□□□ -0.76
ABCD4-221ENST00000554453 PHF11Q9UIL8 331 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 ATG4BQ9Y4P1 393 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 ASB4Q9Y574 426 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 HRH3Q9Y5N1 445 aa10.31□□□□□ -0.76
ABCD4-221ENST00000554453 ZNF354AO60765 605 aaPredicted RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 GPR75O95800 540 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 IGKV3-11P04433 115 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 COL6A2P12110 1019 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 COX7A2P14406 83 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 RFC3P40938 356 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 MAGEA12P43365 314 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 PIK3CGP48736 1102 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 SERPINB8P50452 374 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 SERPINB9P50453 376 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 RAP1GDS1P52306 607 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 HNRNPH2P55795 449 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 GPR85P60893 370 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 PPIAP62937 165 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 DDX39BQ13838 428 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 UAP1Q16222 522 aaPredicted RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 CPSF6Q16630 551 aaKnown RBP eCLIP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 GLE1Q53GS7 698 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 TECRLQ5HYJ1 363 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 C18orf63Q68DL7 685 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 TMEM211Q6ICI0 200 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 ARHGAP11AQ6P4F7 1023 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 OPN5Q6U736 354 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 RTL4Q6ZR62 310 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 MCEMP1Q8IX19 187 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 SRRM1Q8IYB3 904 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 SLC15A4Q8N697 577 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 GOLM1Q8NBJ4 401 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 OR2M7Q8NG81 312 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 NUBPLQ8TB37 319 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 ISL2Q96A47 359 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 PPWD1Q96BP3 646 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 MTFMTQ96DP5 389 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 SCYL1Q96KG9 808 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 DGAT2Q96PD7 388 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 NTMT1Q9BV86 223 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 ZNF717Q9BY31 904 aaPredicted RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 DEFB127Q9H1M4 99 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 VPS11Q9H270 941 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 ZNF358Q9NW07 568 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
ABCD4-221ENST00000554453 TMCO1Q9UM00 188 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 RNF11Q9Y3C5 154 aa10.3□□□□□ -0.76
ABCD4-221ENST00000554453 A0A0A6YYD5 115 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 A0A1W2PR48 441 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 PINLYPA6NC86 204 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ENO4A6NNW6 628 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 WASHC1A8K0Z3 465 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 STX16-NPEPL1H3BU86 382 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 STX16O14662 325 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 EEDO75530 441 aaKnown RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 PDE9AO76083 593 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 SIX3O95343 332 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 CLDN9O95484 217 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ALOX15P16050 662 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 GALNSP34059 522 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 PTGER4P35408 488 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 BUD31P41223 144 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 NEK2P51955 445 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 PHEXP78562 749 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 FOLH1Q04609 750 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 CDSNQ15517 529 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ZNF791Q3KP31 576 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 UBAP2Q5T6F2 1119 aaKnown RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 DGAT2L6Q6ZPD8 337 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 MYLK4Q86YV6 388 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 HOMEZQ8IX15 550 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ST13P4Q8IZP2 240 aaPredicted RBP10.29□□□□□ -0.76
ABCD4-221ENST00000554453 MNS1Q8NEH6 495 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ATP6V1E2Q96A05 226 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 ART5Q96L15 291 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 SERPINI1Q99574 410 aa10.29□□□□□ -0.76
ABCD4-221ENST00000554453 FAM173AQ9BQD7 235 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms