RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SLCO1B7G3V0H7 640 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 CRCPO75575 148 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 KRT6AP02538 564 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 KRT6BP04259 564 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 ICAM2P13598 275 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 KRT6CP48668 564 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 EMP3P54852 163 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 CASP6P55212 293 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 RIPPLY3P57055 190 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 AP2B1P63010 937 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 MAT1AQ00266 395 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF630Q2M218 657 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 SLC9B1Q4ZJI4 515 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 EPGNQ6UW88 154 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 Q6ZSR9 355 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 TRIM46Q7Z4K8 759 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 VN1R4Q7Z5H5 301 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 PIGWQ7Z7B1 504 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 ZC3H7AQ8IWR0 971 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 KRT78Q8N1N4 520 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 MFSD9Q8NBP5 474 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 HUS1BQ8NHY5 278 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 CREB3L4Q8TEY5 395 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF473Q8WTR7 871 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 RERGQ96A58 199 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 MTFMTQ96DP5 389 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 MAELQ96JY0 434 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 OR2A5Q96R48 311 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 HBEGFQ99075 208 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 EBF4Q9BQW3 602 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 ACPTQ9BZG2 426 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 TGIF2Q9GZN2 237 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 AICDAQ9GZX7 198 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 FAM107BQ9H098 131 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 STMN3Q9NZ72 180 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 SNX6Q9UNH7 406 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 CSMD2Q7Z408 3487 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 FBN2P35556 2912 aa13.15□□□□□ -0.3
SPTLC2-202ENST00000554365 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 A8MUI8 341 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 FOXS1O43638 330 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 OR1F1O43749 312 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 SNX3O60493 162 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 SLC19A2O60779 497 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ULK1O75385 1050 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ETHE1O95571 254 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 FAM107AO95990 144 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 LINC00032P0C843 101 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 C8orf89P0DMQ9 161 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 PCNAP12004 261 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 AHRP35869 848 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 IDH3AP50213 366 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 AQP5P55064 265 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 RPS15AP62244 130 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 IFT88Q13099 833 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 RBBP5Q15291 538 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 HIST2H2ACQ16777 129 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.314e-6■□□□□ 10.9
SPTLC2-202ENST00000554365 SGO1Q5FBB7 561 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 MFSD4BQ5TF39 518 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 GARNL3Q5VVW2 1013 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 HIST2H2AA3Q6FI13 130 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 TMEM205Q6UW68 189 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 AFAP1L2Q8N4X5 818 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 SELENOMQ8WWX9 145 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 STON2Q8WXE9 905 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 UBE2E3Q969T4 207 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 MTERF1Q99551 399 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ELAC2Q9BQ52 826 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 TUBB6Q9BUF5 446 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 NSRP1Q9H0G5 558 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ELOVL6Q9H5J4 265 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 DCTN4Q9UJW0 460 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 PPT2Q9UMR5 302 aa13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-202ENST00000554365 IGHV3-20A0A0C4DH32 117 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 NPIPB8E9PQR5 432 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 FOXE1O00358 373 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 P2RX6O15547 441 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 WISP2O76076 250 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 SEC24DO94855 1032 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 CHEK2O96017 543 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 ESRRAP11474 423 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 PIK3CBP42338 1070 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 EFNA3P52797 238 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 RPS13P62277 151 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms